RNA id: TCONS_00043749


Basic Information

Item Value
RNA id TCONS_00043749
length 117
RNA type rRNA
GC content 0.52
exon number 1
gene id XLOC_022149
representative True

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 7581186 ~ 7581302 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gCCATATTCCATATCACCCTGCAACCCAAggctggttactcactgaaggtaagcagggctgtgcctggtctgtccctggatgggagaccacataggaaaacaaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000177521

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00044951 lncRNA downstream 152593 7419810 ~ 7428593 (-) True XLOC_022148
TCONS_00044950 lncRNA downstream 257307 7309563 ~ 7323879 (-) True XLOC_022147
TCONS_00044948 lncRNA downstream 363612 7170866 ~ 7217574 (-) False XLOC_022144
TCONS_00043746 lncRNA downstream 363698 7170866 ~ 7217488 (-) False XLOC_022144
TCONS_00044947 lncRNA downstream 363703 7170866 ~ 7217483 (-) False XLOC_022144
TCONS_00044952 lncRNA upstream 151837 7733139 ~ 7735392 (-) True XLOC_022151
TCONS_00043760 lncRNA upstream 368783 7950085 ~ 7971776 (-) True XLOC_022155
TCONS_00044715 lncRNA upstream 437473 8018775 ~ 8124492 (-) False XLOC_022156
TCONS_00044953 lncRNA upstream 437867 8019169 ~ 8155055 (-) True XLOC_022156
TCONS_00044954 lncRNA upstream 682257 8263559 ~ 8281746 (-) False XLOC_022157
TCONS_00043745 mRNA downstream 455692 7067196 ~ 7125494 (-) True XLOC_022143
TCONS_00043743 mRNA downstream 528774 6998633 ~ 7052412 (-) False XLOC_022142
TCONS_00043744 mRNA downstream 528824 7000180 ~ 7052362 (-) True XLOC_022142
TCONS_00043738 mRNA downstream 598200 6948941 ~ 6982986 (-) False XLOC_022140
TCONS_00043750 mRNA upstream 10707 7592009 ~ 7594723 (-) False XLOC_022150
TCONS_00043752 mRNA upstream 10945 7592247 ~ 7674902 (-) False XLOC_022150
TCONS_00043751 mRNA upstream 10945 7592247 ~ 7674902 (-) True XLOC_022150
TCONS_00043753 mRNA upstream 162179 7743481 ~ 7755373 (-) True XLOC_022152
TCONS_00043755 mRNA upstream 180731 7762033 ~ 7799184 (-) False XLOC_022153
TCONS_00043748 other downstream 370924 7210157 ~ 7210262 (-) True XLOC_022146
TCONS_00043747 other downstream 408983 7172120 ~ 7172203 (-) True XLOC_022144
TCONS_00043741 other downstream 598270 6966332 ~ 6982916 (-) True XLOC_022140
TCONS_00043740 other downstream 598312 6961520 ~ 6982874 (-) False XLOC_022140
TCONS_00043708 other downstream 2149669 5431418 ~ 5431517 (-) True XLOC_022121
TCONS_00043758 other upstream 217791 7799093 ~ 7823785 (-) True XLOC_022153
TCONS_00043759 other upstream 330807 7912109 ~ 7912223 (-) True XLOC_022154
TCONS_00043764 other upstream 1735276 9316578 ~ 9316694 (-) True XLOC_022161
TCONS_00043765 other upstream 1773520 9354822 ~ 9354931 (-) True XLOC_022162
TCONS_00043776 other upstream 2271594 9852896 ~ 9853010 (-) True XLOC_022167

Expression Profile

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