RNA id: TCONS_00043759


Basic Information

Item Value
RNA id TCONS_00043759
length 115
RNA type rRNA
GC content 0.43
exon number 1
gene id XLOC_022154
representative True

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 7912109 ~ 7912223 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGCAGTAAGGATAACAacagtttgtttattattaattattattaagctaagcagggctgcgcctggtcagtccctggatgggagaccacatggtaaagctaggttgctgctggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000180526

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00044952 lncRNA downstream 176717 7733139 ~ 7735392 (-) True XLOC_022151
TCONS_00044951 lncRNA downstream 483516 7419810 ~ 7428593 (-) True XLOC_022148
TCONS_00044950 lncRNA downstream 588230 7309563 ~ 7323879 (-) True XLOC_022147
TCONS_00044948 lncRNA downstream 694535 7170866 ~ 7217574 (-) False XLOC_022144
TCONS_00043760 lncRNA upstream 37862 7950085 ~ 7971776 (-) True XLOC_022155
TCONS_00044715 lncRNA upstream 106552 8018775 ~ 8124492 (-) False XLOC_022156
TCONS_00044953 lncRNA upstream 106946 8019169 ~ 8155055 (-) True XLOC_022156
TCONS_00044954 lncRNA upstream 351336 8263559 ~ 8281746 (-) False XLOC_022157
TCONS_00044955 lncRNA upstream 352648 8264871 ~ 8267563 (-) False XLOC_022157
TCONS_00043757 mRNA downstream 85260 7795422 ~ 7826849 (-) False XLOC_022153
TCONS_00043755 mRNA downstream 112925 7762033 ~ 7799184 (-) False XLOC_022153
TCONS_00043754 mRNA downstream 112925 7762033 ~ 7799184 (-) False XLOC_022153
TCONS_00043756 mRNA downstream 114902 7769444 ~ 7797207 (-) False XLOC_022153
TCONS_00043753 mRNA downstream 156736 7743481 ~ 7755373 (-) True XLOC_022152
TCONS_00043761 mRNA upstream 369084 8281307 ~ 8373807 (-) False XLOC_022157
TCONS_00043762 mRNA upstream 372569 8284792 ~ 8373676 (-) True XLOC_022157
TCONS_00043763 mRNA upstream 806727 8718950 ~ 8733092 (-) True XLOC_022158
TCONS_00043766 mRNA upstream 1488202 9400425 ~ 9492055 (-) False XLOC_022163
TCONS_00043767 mRNA upstream 1489375 9401598 ~ 9492266 (-) False XLOC_022163
TCONS_00043758 other downstream 88324 7799093 ~ 7823785 (-) True XLOC_022153
TCONS_00043749 other downstream 330807 7581186 ~ 7581302 (-) True XLOC_022149
TCONS_00043748 other downstream 701847 7210157 ~ 7210262 (-) True XLOC_022146
TCONS_00043747 other downstream 739906 7172120 ~ 7172203 (-) True XLOC_022144
TCONS_00043741 other downstream 929193 6966332 ~ 6982916 (-) True XLOC_022140
TCONS_00043764 other upstream 1404355 9316578 ~ 9316694 (-) True XLOC_022161
TCONS_00043765 other upstream 1442599 9354822 ~ 9354931 (-) True XLOC_022162
TCONS_00043776 other upstream 1940673 9852896 ~ 9853010 (-) True XLOC_022167
TCONS_00043794 other upstream 2751719 10663942 ~ 10681453 (-) False XLOC_022175
TCONS_00043804 other upstream 3620117 11532340 ~ 11532470 (-) True XLOC_022182