RNA id: TCONS_00043764


Basic Information

Item Value
RNA id TCONS_00043764
length 117
RNA type rRNA
GC content 0.52
exon number 1
gene id XLOC_022161
representative True

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 9316578 ~ 9316694 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGCCACAACCATattaccctgcagcccaagaccggttactcactgaagctaagcagggctgaacctggtcagtacctggatgagagaccacatggggaaactgggttgctgttgaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000180025

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00044957 lncRNA downstream 480240 8835967 ~ 8836338 (-) True XLOC_022160
TCONS_00044956 lncRNA downstream 515823 8799037 ~ 8800755 (-) True XLOC_022159
TCONS_00044954 lncRNA downstream 1034832 8263559 ~ 8281746 (-) False XLOC_022157
TCONS_00044955 lncRNA downstream 1049015 8264871 ~ 8267563 (-) False XLOC_022157
TCONS_00044953 lncRNA downstream 1161523 8019169 ~ 8155055 (-) True XLOC_022156
TCONS_00044958 lncRNA upstream 98786 9415480 ~ 9422349 (-) True XLOC_022163
TCONS_00043769 lncRNA upstream 478036 9794730 ~ 9807539 (-) False XLOC_022165
TCONS_00043788 lncRNA upstream 933513 10250207 ~ 10251099 (-) False XLOC_022171
TCONS_00043789 lncRNA upstream 934526 10251220 ~ 10252276 (-) True XLOC_022171
TCONS_00044959 lncRNA upstream 975474 10292168 ~ 10394443 (-) False XLOC_022172
TCONS_00043763 mRNA downstream 583486 8718950 ~ 8733092 (-) True XLOC_022158
TCONS_00043761 mRNA downstream 942771 8281307 ~ 8373807 (-) False XLOC_022157
TCONS_00043762 mRNA downstream 942902 8284792 ~ 8373676 (-) True XLOC_022157
TCONS_00043757 mRNA downstream 1489729 7795422 ~ 7826849 (-) False XLOC_022153
TCONS_00043755 mRNA downstream 1517394 7762033 ~ 7799184 (-) False XLOC_022153
TCONS_00043766 mRNA upstream 83731 9400425 ~ 9492055 (-) False XLOC_022163
TCONS_00043767 mRNA upstream 84904 9401598 ~ 9492266 (-) False XLOC_022163
TCONS_00043768 mRNA upstream 250640 9567334 ~ 9768700 (-) True XLOC_022164
TCONS_00043770 mRNA upstream 478036 9794730 ~ 9807578 (-) False XLOC_022165
TCONS_00043771 mRNA upstream 484028 9800722 ~ 9807546 (-) True XLOC_022165
TCONS_00043759 other downstream 1404355 7912109 ~ 7912223 (-) True XLOC_022154
TCONS_00043758 other downstream 1492793 7799093 ~ 7823785 (-) True XLOC_022153
TCONS_00043749 other downstream 1735276 7581186 ~ 7581302 (-) True XLOC_022149
TCONS_00043748 other downstream 2106316 7210157 ~ 7210262 (-) True XLOC_022146
TCONS_00043747 other downstream 2144375 7172120 ~ 7172203 (-) True XLOC_022144
TCONS_00043765 other upstream 38128 9354822 ~ 9354931 (-) True XLOC_022162
TCONS_00043776 other upstream 536202 9852896 ~ 9853010 (-) True XLOC_022167
TCONS_00043794 other upstream 1347248 10663942 ~ 10681453 (-) False XLOC_022175
TCONS_00043804 other upstream 2215646 11532340 ~ 11532470 (-) True XLOC_022182
TCONS_00043805 other upstream 2270723 11587417 ~ 11587532 (-) True XLOC_022183