RNA id: TCONS_00043813


Basic Information

Item Value
RNA id TCONS_00043813
length 115
RNA type rRNA
GC content 0.54
exon number 1
gene id XLOC_022187
representative True

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 12068120 ~ 12068234 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCTGGcagttagctctctgcaacttttacacggtcacccactgaagctaagcagggctgagcctggtcagtacctcgatgggagaccacatggaaaagcttgGTTGCTGCCAGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000192138

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00044965 lncRNA downstream 47509 12017717 ~ 12020611 (-) False XLOC_022185
TCONS_00044717 lncRNA downstream 47540 12019687 ~ 12020580 (-) True XLOC_022185
TCONS_00044716 lncRNA downstream 48828 12016703 ~ 12019292 (-) False XLOC_022185
TCONS_00043811 lncRNA downstream 53248 11903807 ~ 12014872 (-) True XLOC_022184
TCONS_00043803 lncRNA downstream 722347 11342604 ~ 11345773 (-) True XLOC_022181
TCONS_00043816 lncRNA upstream 164866 12233100 ~ 12245896 (-) True XLOC_022189
TCONS_00044966 lncRNA upstream 606094 12674328 ~ 12830279 (-) True XLOC_022192
TCONS_00044967 lncRNA upstream 608068 12676302 ~ 12832883 (-) True XLOC_022193
TCONS_00043822 lncRNA upstream 673341 12741575 ~ 12787389 (-) False XLOC_022194
TCONS_00043830 lncRNA upstream 1493484 13561718 ~ 13565351 (-) False XLOC_022198
TCONS_00043809 mRNA downstream 52981 11866345 ~ 12015139 (-) False XLOC_022184
TCONS_00043808 mRNA downstream 52981 11866345 ~ 12015139 (-) False XLOC_022184
TCONS_00043807 mRNA downstream 52981 11866345 ~ 12015139 (-) False XLOC_022184
TCONS_00043810 mRNA downstream 53189 11875539 ~ 12014931 (-) False XLOC_022184
TCONS_00043806 mRNA downstream 197158 11864223 ~ 11870962 (-) False XLOC_022184
TCONS_00043814 mRNA upstream 86931 12155165 ~ 12158685 (-) True XLOC_022188
TCONS_00043815 mRNA upstream 164539 12232773 ~ 12345764 (-) False XLOC_022189
TCONS_00043817 mRNA upstream 350379 12418613 ~ 12423778 (-) True XLOC_022190
TCONS_00043818 mRNA upstream 360491 12428725 ~ 12453700 (-) True XLOC_022191
TCONS_00043819 mRNA upstream 614119 12682353 ~ 12788262 (-) False XLOC_022194
TCONS_00043805 other downstream 480588 11587417 ~ 11587532 (-) True XLOC_022183
TCONS_00043804 other downstream 535650 11532340 ~ 11532470 (-) True XLOC_022182
TCONS_00043794 other downstream 1386667 10663942 ~ 10681453 (-) False XLOC_022175
TCONS_00043776 other downstream 2215110 9852896 ~ 9853010 (-) True XLOC_022167
TCONS_00043765 other downstream 2713189 9354822 ~ 9354931 (-) True XLOC_022162
TCONS_00043831 other upstream 1567559 13635793 ~ 13635907 (-) True XLOC_022200
TCONS_00043832 other upstream 1646152 13714386 ~ 13714500 (-) True XLOC_022201
TCONS_00043837 other upstream 1786735 13854969 ~ 13857517 (-) False XLOC_022205
TCONS_00043838 other upstream 1793186 13861420 ~ 13874600 (-) True XLOC_022205
TCONS_00043841 other upstream 1921130 13989364 ~ 13989482 (-) True XLOC_022207