Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1736871 |
| length | 254 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 1 |
| gene id | LOC110513922 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 12404859 ~ 12415478 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004674 | protein serine/threonine kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1736869 | lncRNA | upstream | 128 | 12414542 ~ 12415073 (+) | False | LOC110513922 |
| TU1736865 | lncRNA | upstream | 21840 | 12391778 ~ 12393361 (+) | True | G1517302 |
| TU1736846 | lncRNA | upstream | 38913 | 12367547 ~ 12376288 (+) | True | G1517284 |
| TU1736838 | lncRNA | upstream | 49113 | 12365306 ~ 12366088 (+) | True | G1517277 |
| TU1736840 | lncRNA | upstream | 54492 | 12359379 ~ 12360709 (+) | True | G1517279 |
| TU1736876 | lncRNA | downstream | 2462 | 12417916 ~ 12418222 (+) | True | G1517311 |
| TU1736877 | lncRNA | downstream | 3915 | 12419369 ~ 12419744 (+) | True | G1517312 |
| TU1736883 | lncRNA | downstream | 23740 | 12439194 ~ 12439407 (+) | True | G1517318 |
| TU1736890 | lncRNA | downstream | 53570 | 12469024 ~ 12469491 (+) | True | G1517321 |
| TU1736892 | lncRNA | downstream | 91649 | 12507103 ~ 12507368 (+) | True | G1517323 |
| XM_036951369.1 | mRNA | upstream | 6198 | 12404861 ~ 12409003 (+) | False | LOC110513922 |
| XM_036951348.1 | mRNA | upstream | 11168 | 12390243 ~ 12404033 (+) | False | LOC110527229 |
| XM_036951347.1 | mRNA | upstream | 11168 | 12395739 ~ 12404033 (+) | True | LOC110527229 |
| XM_021570831.2 | mRNA | upstream | 29577 | 12381426 ~ 12385624 (+) | False | LOC110495532 |
| XM_036951367.1 | mRNA | downstream | 33108 | 12448562 ~ 12454072 (+) | True | LOC118941034 |
| XM_036951337.1 | mRNA | downstream | 44555 | 12460009 ~ 12467899 (+) | True | LOC110527226 |
| XM_036951365.1 | mRNA | downstream | 126810 | 12542264 ~ 12545786 (+) | True | LOC110512988 |
| XM_021608381.2 | mRNA | downstream | 134201 | 12549655 ~ 12552772 (+) | True | LOC110527217 |
| XM_036951306.1 | mRNA | downstream | 137119 | 12552573 ~ 12569425 (+) | True | LOC110527211 |
| TU1736637 | other | upstream | 474096 | 11940062 ~ 11941105 (+) | False | G1517150 |
| TU1736489 | other | upstream | 771443 | 11642789 ~ 11643758 (+) | True | G1517019 |
| TU1736485 | other | upstream | 780222 | 11633067 ~ 11634979 (+) | True | G1517015 |
| TU1735957 | other | upstream | 1322647 | 11086085 ~ 11092554 (+) | True | LOC118941092 |
| TU1735992 | other | upstream | 1398112 | 11016765 ~ 11017089 (+) | True | G1516637 |
| TU1736988 | other | downstream | 418197 | 12833651 ~ 12872163 (+) | True | G1517414 |
| TU1737033 | other | downstream | 519200 | 12934654 ~ 12936278 (+) | True | G1517456 |
| TU1737034 | other | downstream | 522069 | 12937523 ~ 12942494 (+) | True | G1517457 |
| TU1737133 | other | downstream | 771647 | 13187101 ~ 13188080 (+) | True | G1517545 |
| TU1739079 | other | downstream | 2019308 | 14434762 ~ 14436120 (+) | True | G1519096 |
