Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021571965.2 |
| length | 1454 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 6 |
| gene id | LOC110496202 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 39358398 ~ 39372505 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006094 | gluconeogenesis | biological_process |
| GO:0006096 | glycolytic process | biological_process |
| GO:0006098 | pentose-phosphate shunt | biological_process |
| GO:0004807 | triose-phosphate isomerase activity | molecular_function |
| id | description |
|---|---|
| K01803 | TPI, tpiA; triosephosphate isomerase (TIM) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1770257 | lncRNA | downstream | 89580 | 39268616 ~ 39268818 (-) | True | G1547041 |
| TU1770255 | lncRNA | downstream | 94144 | 39263873 ~ 39264254 (-) | True | G1547039 |
| TU1770254 | lncRNA | downstream | 95219 | 39262921 ~ 39263179 (-) | True | G1547038 |
| TU1770163 | lncRNA | downstream | 120353 | 39237654 ~ 39238045 (-) | True | LOC110496197 |
| TU1770144 | lncRNA | downstream | 125318 | 39232559 ~ 39233080 (-) | True | G1546933 |
| TU1770270 | lncRNA | upstream | 2071 | 39374576 ~ 39384675 (-) | False | G1547052 |
| TU1770271 | lncRNA | upstream | 2071 | 39374576 ~ 39382376 (-) | True | G1547052 |
| TU1770322 | lncRNA | upstream | 41420 | 39413925 ~ 39414131 (-) | True | G1547103 |
| TU1770323 | lncRNA | upstream | 41668 | 39414173 ~ 39414433 (-) | True | G1547104 |
| TU1770326 | lncRNA | upstream | 44045 | 39416550 ~ 39416805 (-) | True | G1547107 |
| XM_021571966.2 | mRNA | downstream | 31360 | 39308820 ~ 39327038 (-) | False | LOC110496203 |
| XM_021571969.2 | mRNA | downstream | 31360 | 39308820 ~ 39327038 (-) | True | LOC110496203 |
| XM_021571967.2 | mRNA | downstream | 31564 | 39308819 ~ 39326834 (-) | False | LOC110496203 |
| XM_021571968.2 | mRNA | downstream | 31635 | 39308819 ~ 39326763 (-) | False | LOC110496203 |
| XM_036952738.1 | mRNA | downstream | 62457 | 39269584 ~ 39295941 (-) | False | LOC110496200 |
| XM_021571970.2 | mRNA | upstream | 3938 | 39376443 ~ 39383490 (-) | True | LOC110496204 |
| XM_021571971.2 | mRNA | upstream | 16710 | 39389215 ~ 39413466 (-) | True | LOC110496205 |
| XM_021571973.2 | mRNA | upstream | 61280 | 39433785 ~ 39452164 (-) | False | LOC110496206 |
| XR_005037469.1 | mRNA | upstream | 61280 | 39433785 ~ 39452164 (-) | True | LOC110496206 |
| XM_036952754.1 | mRNA | upstream | 94921 | 39467426 ~ 39535553 (-) | False | LOC110496815 |
| TU1769526 | other | downstream | 570597 | 38776284 ~ 38787801 (-) | True | G1546396 |
| TU1769511 | other | downstream | 584714 | 38768097 ~ 38773684 (-) | True | G1546385 |
| TU1769487 | other | downstream | 682369 | 38674441 ~ 38676029 (-) | True | LOC110496175 |
| TU1769405 | other | downstream | 795080 | 38559649 ~ 38563318 (-) | True | LOC110496167 |
| TU1769139 | other | downstream | 1144349 | 38165250 ~ 38214049 (-) | True | G1546053 |
| TU1770682 | other | upstream | 253270 | 39625775 ~ 39631098 (-) | True | LOC110496208 |
| TU1770674 | other | upstream | 270350 | 39642855 ~ 39646533 (-) | False | LOC110496816 |
| TU1770675 | other | upstream | 270350 | 39642855 ~ 39648014 (-) | False | LOC110496816 |
| TU1770684 | other | upstream | 312282 | 39684787 ~ 39688681 (-) | True | LOC110496816 |
| TU1771745 | other | upstream | 1013465 | 40385970 ~ 40391883 (-) | True | G1548367 |
