Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021572029.1 |
| length | 616 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 6 |
| gene id | rps18 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 40469109 ~ 40471565 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0051726 | regulation of cell cycle | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0006412 | translation | biological_process |
| GO:0042254 | ribosome biogenesis | biological_process |
| GO:0022627 | cytosolic small ribosomal subunit | cellular_component |
| GO:0019843 | rRNA binding | molecular_function |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02964 | RP-S18e, RPS18; small subunit ribosomal protein S18e |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1771724 | lncRNA | downstream | 53419 | 40414143 ~ 40415690 (-) | True | LOC101268904 |
| TU1771820 | lncRNA | downstream | 98731 | 40370046 ~ 40370378 (-) | True | G1548439 |
| TU1771799 | lncRNA | downstream | 151888 | 40316985 ~ 40317221 (-) | True | G1548418 |
| TU1771798 | lncRNA | downstream | 152526 | 40316319 ~ 40316583 (-) | True | G1548417 |
| TU1771794 | lncRNA | downstream | 157096 | 40311798 ~ 40312013 (-) | True | G1548413 |
| TU1771892 | lncRNA | upstream | 47008 | 40518573 ~ 40518783 (-) | True | G1548508 |
| TU1771914 | lncRNA | upstream | 71426 | 40542991 ~ 40543403 (-) | True | G1548520 |
| TU1771915 | lncRNA | upstream | 73102 | 40544667 ~ 40544898 (-) | True | G1548521 |
| TU1771921 | lncRNA | upstream | 82848 | 40554413 ~ 40554685 (-) | True | G1548525 |
| TU1771936 | lncRNA | upstream | 108025 | 40579590 ~ 40580803 (-) | True | G1548540 |
| XR_005037476.1 | mRNA | downstream | 13561 | 40445255 ~ 40455548 (-) | True | LOC110496236 |
| XR_005037475.1 | mRNA | downstream | 22199 | 40445255 ~ 40446910 (-) | False | LOC110496236 |
| XM_021572015.2 | mRNA | downstream | 39636 | 40417575 ~ 40429473 (-) | True | LOC100136269 |
| XM_036952801.1 | mRNA | downstream | 53025 | 40392620 ~ 40416084 (-) | False | LOC101268904 |
| XM_036952799.1 | mRNA | downstream | 53027 | 40392620 ~ 40416082 (-) | False | LOC101268904 |
| NM_001246345.1 | mRNA | upstream | 13796 | 40485361 ~ 40487640 (-) | True | LOC100653472 |
| XR_005037480.1 | mRNA | upstream | 29173 | 40500738 ~ 40501410 (-) | True | LOC118941162 |
| XR_005037481.1 | mRNA | upstream | 30100 | 40501665 ~ 40503478 (-) | True | LOC118941163 |
| XR_002469532.2 | mRNA | upstream | 73644 | 40545209 ~ 40553619 (-) | True | LOC110496249 |
| XR_005037479.1 | mRNA | upstream | 203904 | 40675469 ~ 40678071 (-) | False | LOC118941161 |
| TU1771745 | other | downstream | 77226 | 40385970 ~ 40391883 (-) | True | G1548367 |
| TU1770684 | other | downstream | 780428 | 39684787 ~ 39688681 (-) | True | LOC110496816 |
| TU1770675 | other | downstream | 821095 | 39642855 ~ 39648014 (-) | False | LOC110496816 |
| TU1770674 | other | downstream | 822576 | 39642855 ~ 39646533 (-) | False | LOC110496816 |
| TU1770682 | other | downstream | 838011 | 39625775 ~ 39631098 (-) | True | LOC110496208 |
| TU1771911 | other | upstream | 168610 | 40640175 ~ 40685641 (-) | True | G1548517 |
| TU1772024 | other | upstream | 434122 | 40905687 ~ 40908625 (-) | True | LOC118941164 |
| TU1773336 | other | upstream | 1191871 | 41663436 ~ 41671514 (-) | False | LOC110496277 |
| TU1773335 | other | upstream | 1196695 | 41668260 ~ 41671514 (-) | True | LOC110496277 |
| TU1773748 | other | upstream | 1843721 | 42315286 ~ 42316079 (-) | True | G1550177 |
