RNA id: TU1732936


Basic Information

Item Value
RNA id TU1732936
length 223
lncRNA type intronic
GC content 0.44
exon number 2
gene id G1514286
representative True

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 8610896 ~ 8611254 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

attagggttagcagtgtggttagggttagacattagggtttgcagtgtagttaaggttagggatagacattagggttagcagtgtggttaaggttagggttagacattagggttagcagtgtggttagggttagacataggggttaacagtgtggttagggttagacattagggttagcagtgtggttaaggttagggttagacataggggttaacagtgtgg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1732935 lncRNA upstream 5087 8605608 ~ 8605809 (+) True G1514285
TU1732934 lncRNA upstream 6668 8604000 ~ 8604228 (+) True G1514284
TU1732923 lncRNA upstream 26660 8583952 ~ 8584236 (+) True G1514278
TU1732916 lncRNA upstream 35875 8574791 ~ 8575021 (+) True G1514272
TU1732898 lncRNA upstream 85409 8522991 ~ 8525487 (+) True G1514255
TU1732937 lncRNA downstream 5383 8616637 ~ 8616844 (+) True G1514287
TU1732938 lncRNA downstream 5890 8617144 ~ 8617353 (+) True G1514288
TU1732939 lncRNA downstream 6189 8617443 ~ 8617664 (+) True G1514289
TU1732941 lncRNA downstream 8720 8619974 ~ 8620205 (+) True G1514291
TU1732942 lncRNA downstream 10644 8621898 ~ 8622128 (+) True G1514292
XM_036951635.1 mRNA upstream 99700 8506139 ~ 8511196 (+) False LOC118936321
XM_036951636.1 mRNA upstream 104642 8498352 ~ 8506254 (+) False LOC110528849
XM_036951631.1 mRNA upstream 131535 8475086 ~ 8479361 (+) False LOC110528836
XM_036951643.1 mRNA downstream 12997 8624251 ~ 8676626 (+) False LOC110495394
XM_036951641.1 mRNA downstream 13040 8624294 ~ 8676626 (+) False LOC110495394
XM_036951653.1 mRNA downstream 13711 8624965 ~ 8674672 (+) False LOC110495394
XM_036951637.1 mRNA downstream 13711 8624965 ~ 8676626 (+) False LOC110495394
XM_036951638.1 mRNA downstream 13711 8624965 ~ 8676626 (+) False LOC110495394
TU1732918 other upstream 34071 8576493 ~ 8576825 (+) True G1514274
TU1732862 other upstream 106560 8498550 ~ 8504336 (+) True LOC110528849
TU1732800 other upstream 198097 8347227 ~ 8412799 (+) True G1514180
TU1732572 other upstream 595866 8013860 ~ 8015030 (+) True G1514045
TU1732457 other upstream 809838 7794270 ~ 7801058 (+) True LOC110511355
TU1732723 other downstream 63075 8674329 ~ 8676511 (+) False LOC110495394
TU1732736 other downstream 63075 8674329 ~ 8676511 (+) False LOC110495394
TU1732741 other downstream 63075 8674329 ~ 8676511 (+) True LOC110495394
TU1732757 other downstream 67194 8678448 ~ 8680210 (+) True LOC110495395
TU1733898 other downstream 389144 9000398 ~ 9003126 (+) True G1515005

Expression Profile