RNA id: TU1735992


Basic Information

Item Value
RNA id TU1735992
length 325
RNA type TUCP
GC content 0.42
exon number 1
gene id G1516637
representative True

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 11016765 ~ 11017089 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ATAGGAAAACAGACAGTGTTTATTAGTTTTTCATGTTGACTGTTAGGGGTGCAGCAGAGCAGATACTGTACCTCTTAGGGACTTCCAATGGTCAACCATCTGGAAACCATTCTCACTCAAGTAGAGCCAAAATAGAATATATTGttctctacctacctatccctctctacctacctatccctctctacctacctatcactctctacctacctatcactctctacctacctatccctctctacctacctatcactctctacctacctatcactctctacctacctatcattCTCTACCTatatatcactctctacctacctatccc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1735989 lncRNA upstream 4374 11012158 ~ 11012391 (+) True G1516634
TU1735976 lncRNA upstream 24799 10991065 ~ 10991966 (+) True G1516622
TU1735971 lncRNA upstream 52725 10963120 ~ 10964040 (+) True LOC118941091
TU1735949 lncRNA upstream 91685 10923624 ~ 10925080 (+) True G1516596
TU1735950 lncRNA upstream 91812 10924079 ~ 10924953 (+) True G1516597
TU1735993 lncRNA downstream 100 11017189 ~ 11017403 (+) True G1516638
TU1735994 lncRNA downstream 476 11017565 ~ 11018491 (+) True G1516639
TU1735995 lncRNA downstream 2780 11019869 ~ 11020286 (+) True G1516640
TU1736016 lncRNA downstream 61957 11079046 ~ 11079822 (+) True G1516660
TU1736041 lncRNA downstream 175233 11192322 ~ 11194769 (+) True G1516683
XM_036951793.1 mRNA upstream 37366 10973828 ~ 10979399 (+) True LOC110527282
XM_036951781.1 mRNA upstream 49286 10960744 ~ 10967479 (+) False LOC118936256
XM_036951782.1 mRNA upstream 49295 10961071 ~ 10967470 (+) True LOC118936256
XR_005037369.1 mRNA upstream 51099 10961785 ~ 10965666 (+) False LOC118941091
XM_036951779.1 mRNA upstream 59936 10944403 ~ 10956829 (+) False LOC110527277
XM_036951789.1 mRNA downstream 9263 11026352 ~ 11090629 (+) False LOC118941092
XM_036951795.1 mRNA downstream 76497 11093586 ~ 11189284 (+) True LOC110514120
XR_005037371.1 mRNA downstream 196424 11213513 ~ 11214997 (+) False LOC110527285
XM_036951827.1 mRNA downstream 345522 11362611 ~ 11414702 (+) False LOC110495609
XM_036951823.1 mRNA downstream 345522 11362611 ~ 11420903 (+) False LOC110495609
TU1735389 other upstream 689627 10319310 ~ 10327138 (+) True G1516136
TU1735043 other upstream 844809 10170102 ~ 10171956 (+) True G1515853
TU1734946 other upstream 1041459 9974528 ~ 9975306 (+) True G1515776
TU1733898 other upstream 2013639 9000398 ~ 9003126 (+) True G1515005
TU1732757 other upstream 2336555 8678448 ~ 8680210 (+) True LOC110495395
TU1735957 other downstream 68996 11086085 ~ 11092554 (+) True LOC118941092
TU1736485 other downstream 615978 11633067 ~ 11634979 (+) True G1517015
TU1736489 other downstream 625700 11642789 ~ 11643758 (+) True G1517019
TU1736637 other downstream 922973 11940062 ~ 11941105 (+) False G1517150
TU1736988 other downstream 1816562 12833651 ~ 12872163 (+) True G1517414

Expression Profile