RNA id: TU1736068


Basic Information

Item Value
RNA id TU1736068
length 258
lncRNA type intronic
GC content 0.47
exon number 2
gene id G1516702
representative True

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 11239261 ~ 11239673 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GGCATGGAGGAGTTCCTTTAAAAAGGTAGAGAACATCACCATGTTGGGACTGGGCATGGAGGAGTTCCTTTAAAAAGGTAGAGAACATCACCATGTTGGGACGGGGCATGGAGGAGTTCCTTTAAAAAGGTAGAGAACATCACCATGTTGGGACGAGGCATGGAGGAGTTCCTTTAAAAAGGTAGAGAACATCACCATGTTGGGACGGGGCATGGAGGAGTTCCTTTAAAAAGGTAGAGAACATCGCCCAGACTTTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1736064 lncRNA upstream 7953 11229720 ~ 11231308 (+) True G1516699
TU1736052 lncRNA upstream 17024 11221665 ~ 11222237 (+) True G1516693
TU1736053 lncRNA upstream 22505 11216258 ~ 11216756 (+) True G1516694
TU1735963 lncRNA upstream 24282 11213565 ~ 11214979 (+) True LOC110527285
TU1736041 lncRNA upstream 44492 11192322 ~ 11194769 (+) True G1516683
TU1736292 lncRNA downstream 68557 11308230 ~ 11309024 (+) True G1516862
TU1736305 lncRNA downstream 80755 11320428 ~ 11320676 (+) True G1516875
TU1736334 lncRNA downstream 96566 11336239 ~ 11339456 (+) True G1516891
TU1736343 lncRNA downstream 100715 11340388 ~ 11341350 (+) True G1516899
TU1736357 lncRNA downstream 113776 11353449 ~ 11354445 (+) False G1516911
XR_005037371.1 mRNA upstream 24264 11213513 ~ 11214997 (+) False LOC110527285
XM_036951795.1 mRNA upstream 49977 11093586 ~ 11189284 (+) True LOC110514120
XM_036951786.1 mRNA upstream 148632 10980678 ~ 11090629 (+) False LOC118941092
XM_036951827.1 mRNA downstream 122938 11362611 ~ 11414702 (+) False LOC110495609
XM_036951823.1 mRNA downstream 122938 11362611 ~ 11420903 (+) False LOC110495609
XM_036951824.1 mRNA downstream 122938 11362611 ~ 11420903 (+) False LOC110495609
XM_036951826.1 mRNA downstream 122938 11362611 ~ 11420903 (+) False LOC110495609
XM_036951825.1 mRNA downstream 125986 11365659 ~ 11420903 (+) True LOC110495609
TU1735957 other upstream 146707 11086085 ~ 11092554 (+) True LOC118941092
TU1735992 other upstream 222172 11016765 ~ 11017089 (+) True G1516637
TU1735389 other upstream 912123 10319310 ~ 10327138 (+) True G1516136
TU1735043 other upstream 1067305 10170102 ~ 10171956 (+) True G1515853
TU1734946 other upstream 1263955 9974528 ~ 9975306 (+) True G1515776
TU1736485 other downstream 393394 11633067 ~ 11634979 (+) True G1517015
TU1736489 other downstream 403116 11642789 ~ 11643758 (+) True G1517019
TU1736637 other downstream 700389 11940062 ~ 11941105 (+) False G1517150
TU1736988 other downstream 1593978 12833651 ~ 12872163 (+) True G1517414
TU1737033 other downstream 1694981 12934654 ~ 12936278 (+) True G1517456

Expression Profile