RNA id: TU1736489



Basic Information


Item Value
RNA id TU1736489
length 527
RNA type TUCP
GC content 0.51
exon number 2
gene id G1517019
representative True

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 11642789 ~ 11643758 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gagagggaggaagagatatgcaggagagagatggagggaggaagagatatgcaggagagagatggagagggaggaagagatatgcaggagagacagatggagagggaggaagagatatgcaggagagagatggagagggaggaagagatatgcaggagagacagatggagagggaggaagagatatgggggagagagatggagagggaggaagagatatgcaggagagacagatggagagagaggaagagatatgcaggagagagatggagagggaggaagagatatgcaggagagagatggagagagaggaagagatatgcaggagagacagatggagagggaggaagagatatgcaggagagacagatggagagaggaagagatatgcaggagagagatggagggaggaagagatatgcaggagggagatggaggaagaggggaaaaTAGTGATTAGAGAAGTAGAAAGATGGGGgtaaggaggaagagagatgctCATGGCCCAGTGGTCTGTCTCCCAGAGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1736480 lncRNA upstream 17511 11624596 ~ 11625278 (+) True G1517010
TU1736472 lncRNA upstream 33946 11608248 ~ 11608843 (+) True G1517002
TU1736469 lncRNA upstream 45084 11597292 ~ 11597705 (+) True G1516999
TU1736468 lncRNA upstream 47778 11594662 ~ 11595011 (+) True G1516998
TU1736445 lncRNA upstream 94120 11548398 ~ 11548669 (+) True G1516975
TU1736517 lncRNA downstream 61794 11705552 ~ 11764757 (+) True G1517042
TU1736553 lncRNA downstream 113498 11757256 ~ 11757966 (+) True G1517073
TU1736545 lncRNA downstream 173597 11817355 ~ 11820418 (+) True G1517065
TU1736577 lncRNA downstream 193586 11837344 ~ 11837614 (+) True G1517095
TU1736540 lncRNA downstream 194769 11838527 ~ 11841346 (+) True G1517060
XM_036951829.1 mRNA upstream 185910 11453014 ~ 11456879 (+) True LOC110528750
XM_036951823.1 mRNA upstream 221886 11362611 ~ 11420903 (+) False LOC110495609
XM_036951409.1 mRNA downstream 105971 11749729 ~ 11759288 (+) True LOC110495615
XM_021570956.2 mRNA downstream 122605 11766363 ~ 11772739 (+) False LOC110495622
XM_036951844.1 mRNA downstream 122606 11766364 ~ 11772739 (+) False LOC110495622
XM_036951843.1 mRNA downstream 122608 11766366 ~ 11772739 (+) True LOC110495622
XM_036951842.1 mRNA downstream 129356 11773114 ~ 11779870 (+) True LOC110495619
TU1736485 other upstream 7810 11633067 ~ 11634979 (+) True G1517015
TU1735957 other upstream 550235 11086085 ~ 11092554 (+) True LOC118941092
TU1735992 other upstream 625700 11016765 ~ 11017089 (+) True G1516637
TU1735389 other upstream 1315651 10319310 ~ 10327138 (+) True G1516136
TU1735043 other upstream 1470833 10170102 ~ 10171956 (+) True G1515853
TU1736637 other downstream 296304 11940062 ~ 11941105 (+) False G1517150
TU1736988 other downstream 1189893 12833651 ~ 12872163 (+) True G1517414
TU1737033 other downstream 1290896 12934654 ~ 12936278 (+) True G1517456
TU1737034 other downstream 1293765 12937523 ~ 12942494 (+) True G1517457
TU1737133 other downstream 1543343 13187101 ~ 13188080 (+) True G1517545

Expression Profile