RNA id: TU1736983


Basic Information

Item Value
RNA id TU1736983
length 282
lncRNA type intronic
GC content 0.26
exon number 2
gene id G1517410
representative False

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12789545 ~ 12805543 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

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Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1736981 lncRNA upstream 3570 12774212 ~ 12785975 (+) False G1517409
TU1736982 lncRNA upstream 3570 12783562 ~ 12785975 (+) True G1517409
TU1736980 lncRNA upstream 9176 12774212 ~ 12780369 (+) False G1517409
TU1736979 lncRNA upstream 24338 12763961 ~ 12765207 (+) True G1517408
TU1736957 lncRNA upstream 70546 12718775 ~ 12718999 (+) True G1517386
TU1736991 lncRNA downstream 35840 12841383 ~ 12854300 (+) True G1517417
TU1736996 lncRNA downstream 50971 12856514 ~ 12877270 (+) True G1517422
TU1736994 lncRNA downstream 58987 12864530 ~ 12865350 (+) True G1517420
TU1736992 lncRNA downstream 75193 12880736 ~ 12881992 (+) True G1517418
TU1736990 lncRNA downstream 93267 12898810 ~ 12902980 (+) True G1517416
XM_036951298.1 mRNA upstream 135789 12622325 ~ 12653756 (+) False LOC110497015
XM_036951299.1 mRNA upstream 135789 12622325 ~ 12653756 (+) True LOC110497015
XM_036951315.1 mRNA upstream 179165 12600823 ~ 12610380 (+) False LOC110497019
XM_036951316.1 mRNA upstream 179165 12601164 ~ 12610380 (+) True LOC110497019
XM_021608373.2 mRNA upstream 203394 12571956 ~ 12586151 (+) True LOC110527213
XM_036951326.1 mRNA downstream 68934 12874477 ~ 12879111 (+) False LOC110495518
XM_036951325.1 mRNA downstream 68940 12874483 ~ 12879111 (+) True LOC110495518
XM_021570809.2 mRNA downstream 76968 12882511 ~ 12885631 (+) True LOC110495515
NM_001165113.2 mRNA downstream 80552 12886095 ~ 12898735 (+) True cd3z
NM_001171859.1 mRNA downstream 269521 13075064 ~ 13080819 (+) True gp91phox
TU1736637 other upstream 848440 11940062 ~ 11941105 (+) False G1517150
TU1736489 other upstream 1145787 11642789 ~ 11643758 (+) True G1517019
TU1736485 other upstream 1154566 11633067 ~ 11634979 (+) True G1517015
TU1735957 other upstream 1696991 11086085 ~ 11092554 (+) True LOC118941092
TU1735992 other upstream 1772456 11016765 ~ 11017089 (+) True G1516637
TU1736988 other downstream 28108 12833651 ~ 12872163 (+) True G1517414
TU1737033 other downstream 129111 12934654 ~ 12936278 (+) True G1517456
TU1737034 other downstream 131980 12937523 ~ 12942494 (+) True G1517457
TU1737133 other downstream 381558 13187101 ~ 13188080 (+) True G1517545
TU1739079 other downstream 1629219 14434762 ~ 14436120 (+) True G1519096

Expression Profile