RNA id: TU1739825



Basic Information


Item Value
RNA id TU1739825
length 821
RNA type TUCP
GC content 0.53
exon number 2
gene id G1519733
representative True

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 14813982 ~ 14814886 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GATTTTTATAAGACTGGTTTATTTTTCCAATGACAATGGTACAGACAACATGGAAGcatagagagggggaaggagaaagagaggggttctGAAGTTATGGACAccatcagggagggagggaggaggggttctGAAGTTATGGGCACCatcagggagggagaaaggaggggttCTGAAGTTATGGACACCatcagggagggagaaaggaggggttCTGAAGTTATGGGCACCatcagggagggagaaaggaggggttCTGAAGTTATGGACACcatcagggagggaggaggggttctGAAGTTATGGACAccatcagggagggagggaggaggggttCTGAAGTTATGGGCACCatcagggagggagaaaggaggggttCTGAAGTTATGGACACCatcagggagggagaaaggaggggttCTGAAGTTATGGACACCatcagggagggagaaaggaggggttCTGAAGTTATGGACACCatcagggagggagaaaggaggggttCTGAAGTTATGGACAccatcagggagggagggaggaggggttctGAAGTTATGGACACCatcagggagggagaaaggaggggttCTGAAGTTATGGACAccatcagggagggagggaggaggggttctGAAGTTATGGACAccatcagggagggagggaggaggggttctGAAGTTATGGACAccatcagggagggagggaggaggggttctGAAGTTATGGACACCatcagggagggagaaaggaggggttCTGAAGTTATGGACACCatcagggagggagaaaggaggggttCTGAAGTTATGGACACCatcagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1739729 lncRNA upstream 138277 14672239 ~ 14675705 (+) True G1519654
TU1739661 lncRNA upstream 256859 14556326 ~ 14557123 (+) True LOC110495481
TU1739633 lncRNA upstream 282145 14530073 ~ 14531837 (+) False G1519579
TU1739630 lncRNA upstream 282145 14530596 ~ 14531837 (+) True G1519579
TU1739628 lncRNA upstream 284272 14529089 ~ 14529710 (+) True G1519578
TU1739837 lncRNA downstream 17273 14832159 ~ 14832358 (+) True G1519738
TU1739852 lncRNA downstream 78566 14893452 ~ 14897145 (+) True G1519750
TU1739888 lncRNA downstream 94605 14909491 ~ 14909694 (+) True G1519759
TU1739856 lncRNA downstream 96710 14911596 ~ 14921517 (+) False G1519751
TU1739855 lncRNA downstream 97745 14912631 ~ 14921517 (+) True G1519751
XM_021570724.2 mRNA upstream 14671 14792937 ~ 14799311 (+) False zgc:92380
XM_021570725.2 mRNA upstream 14671 14793232 ~ 14799311 (+) True zgc:92380
XM_021572929.2 mRNA upstream 33155 14779090 ~ 14780827 (+) True LOC110496915
XM_021570731.2 mRNA upstream 49396 14753436 ~ 14764586 (+) True LOC110495457
XM_021570729.2 mRNA upstream 53293 14753436 ~ 14760689 (+) False LOC110495457
XM_021570722.2 mRNA downstream 20508 14835394 ~ 14842885 (+) True LOC110495453
XM_036951919.1 mRNA downstream 43836 14858722 ~ 14861844 (+) True LOC118941101
XM_036951920.1 mRNA downstream 62806 14877692 ~ 14880867 (+) True LOC118936566
XM_036951026.1 mRNA downstream 83268 14898154 ~ 14901354 (+) False il8r
NM_001124279.1 mRNA downstream 83562 14898448 ~ 14901353 (+) False il8r
TU1739660 other upstream 256636 14556326 ~ 14557346 (+) False LOC110495481
TU1739573 other upstream 314845 14498786 ~ 14499137 (+) True G1519538
TU1739079 other upstream 377862 14434762 ~ 14436120 (+) True G1519096
TU1737133 other upstream 1625902 13187101 ~ 13188080 (+) True G1517545
TU1737034 other upstream 1871488 12937523 ~ 12942494 (+) True G1517457
TU1739843 other downstream 83370 14898256 ~ 14900172 (+) True il8r
TU1740022 other downstream 394083 15208969 ~ 15216244 (+) False LOC110495440
TU1740959 other downstream 941607 15756493 ~ 15816005 (+) True G1520649
TU1740883 other downstream 981466 15796352 ~ 15799881 (+) True LOC110495644
TU1741071 other downstream 1104271 15919157 ~ 15922899 (+) True G1520742

Expression Profile