RNA id: XR_005039052.1



Basic Information


Item Value
RNA id XR_005039052.1
length 126
RNA type mRNA
GC content 0.45
exon number 1
gene id LOC118943734
representative True

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 36229306 ~ 36229431 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACATTCTGAAACTTACCTCAGGTGTACCAGTTGTCTGGGGTGAGAACTGTGCCAACAGTATTGTGGTACGTTAAGCTTATTGCCTGCTCTGTATAGCAAGGTGATTAAACCCATGTGCCCACAATC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2066234 lncRNA downstream 9835 36218741 ~ 36219471 (-) True G1805983
TU2066178 lncRNA downstream 119492 36085336 ~ 36109814 (-) True G1805937
TU2066162 lncRNA downstream 173607 36055355 ~ 36055699 (-) True G1805922
TU2066160 lncRNA downstream 176298 36052792 ~ 36053008 (-) True G1805920
TU2066154 lncRNA downstream 183705 36045355 ~ 36045601 (-) True G1805916
TU2066216 lncRNA upstream 13768 36243199 ~ 36247813 (-) True G1805967
TU2066268 lncRNA upstream 50955 36280386 ~ 36287356 (-) True G1806014
TU2066308 lncRNA upstream 113726 36343157 ~ 36345530 (-) True G1806050
TU2066356 lncRNA upstream 212270 36441701 ~ 36512450 (-) True G1806092
TU2066444 lncRNA upstream 340183 36569614 ~ 36657977 (-) True G1806177
XM_036959190.1 mRNA downstream 1177 36106047 ~ 36228129 (-) False LOC110502096
XR_005039051.1 mRNA upstream 1718 36231149 ~ 36231276 (-) True LOC118943733
XM_036959073.1 mRNA upstream 18645 36248076 ~ 36318385 (-) True LOC110502097
XM_036959214.1 mRNA upstream 176310 36405741 ~ 36434386 (-) False hspbap1
XM_036959212.1 mRNA upstream 176310 36405741 ~ 36434918 (-) False hspbap1
XM_036959210.1 mRNA upstream 176310 36405741 ~ 36434921 (-) False hspbap1
TU2066167 other downstream 169538 36057844 ~ 36059768 (-) True G1805927
TU2064375 other downstream 1009607 35207463 ~ 35219699 (-) True LOC110502094
TU2064031 other downstream 1102473 35126479 ~ 35126833 (-) True G1803964
TU2063359 other downstream 1689133 34518506 ~ 34540173 (-) True bard1
TU2061248 other downstream 3268821 32958322 ~ 32960485 (-) False G1801331
TU2066409 other upstream 348317 36577748 ~ 36578711 (-) True LOC110501806
TU2066670 other upstream 706227 36935658 ~ 36936087 (-) True G1806393
TU2066735 other upstream 814130 37043561 ~ 37112474 (-) True G1806449
TU2067385 other upstream 1530540 37759971 ~ 37760248 (-) True G1807020
TU2068246 other upstream 1963991 38193422 ~ 38195096 (-) True G1807750

Expression Profile