Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036959305.1 |
| length | 1379 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 8 |
| gene id | LOC110501866 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 40084457 ~ 40170141 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0006812 | cation transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008324 | cation transmembrane transporter activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2070081 | lncRNA | downstream | 465 | 40080294 ~ 40083992 (-) | True | G1809337 |
| TU2070055 | lncRNA | downstream | 46677 | 40037538 ~ 40037780 (-) | True | G1809313 |
| TU2070049 | lncRNA | downstream | 53066 | 40031132 ~ 40031391 (-) | True | G1809307 |
| TU2070046 | lncRNA | downstream | 58578 | 40025648 ~ 40025879 (-) | True | G1809304 |
| TU2070039 | lncRNA | downstream | 71458 | 40012761 ~ 40012999 (-) | True | G1809297 |
| TU2070163 | lncRNA | upstream | 251 | 40170392 ~ 40183895 (-) | False | G1809405 |
| TU2070162 | lncRNA | upstream | 1630 | 40171771 ~ 40183895 (-) | False | G1809405 |
| TU2070161 | lncRNA | upstream | 7911 | 40178052 ~ 40183895 (-) | True | G1809405 |
| TU2070168 | lncRNA | upstream | 14304 | 40184445 ~ 40185458 (-) | True | G1809410 |
| TU2070176 | lncRNA | upstream | 27454 | 40197595 ~ 40200422 (-) | True | G1809418 |
| XM_036959077.1 | mRNA | downstream | 57304 | 39960431 ~ 40027153 (-) | True | LOC110501865 |
| XM_021579711.2 | mRNA | downstream | 231088 | 39850855 ~ 39853369 (-) | True | tmem177 |
| XM_036959303.1 | mRNA | downstream | 231485 | 39850855 ~ 39852972 (-) | False | tmem177 |
| XM_036959301.1 | mRNA | downstream | 236460 | 39736429 ~ 39847997 (-) | True | LOC110502147 |
| XM_036959299.1 | mRNA | downstream | 236462 | 39736429 ~ 39847995 (-) | False | LOC110502147 |
| XR_005038968.1 | mRNA | upstream | 113264 | 40283405 ~ 40284842 (-) | True | LOC118943637 |
| XM_036959321.1 | mRNA | upstream | 281456 | 40451597 ~ 40494774 (-) | True | LOC110501872 |
| XM_021579726.2 | mRNA | upstream | 505162 | 40675303 ~ 40684544 (-) | True | LOC110501875 |
| XM_036959327.1 | mRNA | upstream | 605067 | 40775208 ~ 40813437 (-) | False | LOC110501878 |
| XM_036959331.1 | mRNA | upstream | 665035 | 40835176 ~ 40845419 (-) | False | LOC110501879 |
| TU2068897 | other | downstream | 1139927 | 38944136 ~ 38944530 (-) | False | G1808299 |
| TU2068898 | other | downstream | 1139927 | 38944136 ~ 38944530 (-) | True | G1808299 |
| TU2068420 | other | downstream | 1472170 | 38575866 ~ 38612287 (-) | True | LOC110502145 |
| TU2068217 | other | downstream | 1871270 | 38208790 ~ 38213187 (-) | False | G1807731 |
| TU2068246 | other | downstream | 1889361 | 38193422 ~ 38195096 (-) | True | G1807750 |
| TU2070925 | other | upstream | 566507 | 40736648 ~ 40813387 (-) | True | LOC110501878 |
| TU2071828 | other | upstream | 1277758 | 41447899 ~ 41465647 (-) | True | LOC110501886 |
| TU2071948 | other | upstream | 1434833 | 41604974 ~ 41605231 (-) | True | G1811042 |
| TU2073040 | other | upstream | 2216681 | 42386822 ~ 42389273 (-) | True | G1812079 |
| TU2073346 | other | upstream | 2434562 | 42604703 ~ 42605020 (-) | True | LOC110502155 |
