Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2071828 |
| length | 977 |
| RNA type | TUCP |
| GC content | 0.42 |
| exon number | 4 |
| gene id | LOC110501886 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 41447899 ~ 41523764 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0043547 | positive regulation of GTPase activity | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0005096 | GTPase activator activity | molecular_function |
| GO:0005543 | phospholipid binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2071812 | lncRNA | downstream | 16869 | 41430763 ~ 41431030 (-) | True | G1810926 |
| TU2071797 | lncRNA | downstream | 36200 | 41411476 ~ 41411699 (-) | True | G1810912 |
| TU2071796 | lncRNA | downstream | 37811 | 41409402 ~ 41410088 (-) | True | G1810911 |
| TU2071794 | lncRNA | downstream | 41472 | 41406165 ~ 41406427 (-) | True | G1810909 |
| TU2071786 | lncRNA | downstream | 50218 | 41397468 ~ 41397681 (-) | True | G1810901 |
| TU2071928 | lncRNA | upstream | 123583 | 41589230 ~ 41590498 (-) | True | G1811025 |
| TU2072083 | lncRNA | upstream | 177122 | 41642769 ~ 41642992 (-) | True | G1811165 |
| TU2072087 | lncRNA | upstream | 180355 | 41646002 ~ 41646266 (-) | True | G1811169 |
| TU2072162 | lncRNA | upstream | 298980 | 41764627 ~ 41764828 (-) | True | G1811240 |
| TU2072202 | lncRNA | upstream | 326787 | 41792434 ~ 41792652 (-) | True | G1811279 |
| XR_005038969.1 | mRNA | downstream | 627 | 41439948 ~ 41447272 (-) | True | LOC118943638 |
| XM_021579736.2 | mRNA | downstream | 396412 | 40992915 ~ 41051487 (-) | False | LOC110501883 |
| XR_002470265.2 | mRNA | downstream | 459688 | 40942404 ~ 40988211 (-) | False | LOC110501882 |
| XR_002470267.2 | mRNA | downstream | 459688 | 40945385 ~ 40988211 (-) | False | LOC110501882 |
| XR_002470266.2 | mRNA | downstream | 459689 | 40942404 ~ 40988210 (-) | False | LOC110501882 |
| LOC110502151 | mRNA | upstream | 146915 | 41612562 ~ 41613136 (-) | True | LOC110502151 |
| XM_021579741.2 | mRNA | upstream | 157174 | 41622821 ~ 41624796 (-) | True | LOC110501887 |
| XM_021579742.2 | mRNA | upstream | 203249 | 41668896 ~ 41743824 (-) | False | LOC110501888 |
| XM_021579743.2 | mRNA | upstream | 236949 | 41702596 ~ 41743824 (-) | True | LOC110501888 |
| XM_021579998.2 | mRNA | upstream | 299316 | 41764963 ~ 41767178 (-) | True | LOC110502131 |
| TU2070925 | other | downstream | 634512 | 40736648 ~ 40813387 (-) | True | LOC110501878 |
| TU2068897 | other | downstream | 2503369 | 38944136 ~ 38944530 (-) | False | G1808299 |
| TU2068898 | other | downstream | 2503369 | 38944136 ~ 38944530 (-) | True | G1808299 |
| TU2068420 | other | downstream | 2835612 | 38575866 ~ 38612287 (-) | True | LOC110502145 |
| TU2068217 | other | downstream | 3234712 | 38208790 ~ 38213187 (-) | False | G1807731 |
| TU2071948 | other | upstream | 139327 | 41604974 ~ 41605231 (-) | True | G1811042 |
| TU2073040 | other | upstream | 921175 | 42386822 ~ 42389273 (-) | True | G1812079 |
| TU2073346 | other | upstream | 1139056 | 42604703 ~ 42605020 (-) | True | LOC110502155 |
| TU2073410 | other | upstream | 1211610 | 42677257 ~ 42677760 (-) | True | G1812404 |
| TU2075666 | other | upstream | 3044760 | 44510407 ~ 44553420 (-) | True | LOC110502171 |
