Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2060147 |
| length | 427 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G1800334 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 31919534 ~ 31919993 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2060044 | lncRNA | downstream | 170356 | 31748923 ~ 31749178 (-) | True | G1800232 |
| TU2059462 | lncRNA | downstream | 287939 | 31631384 ~ 31631595 (-) | True | G1799683 |
| TU2059458 | lncRNA | downstream | 292753 | 31626560 ~ 31626781 (-) | True | G1799679 |
| TU2059436 | lncRNA | downstream | 336416 | 31582659 ~ 31583118 (-) | True | G1799657 |
| TU2059212 | lncRNA | downstream | 473512 | 31445663 ~ 31446022 (-) | True | G1799464 |
| TU2060152 | lncRNA | upstream | 7633 | 31927626 ~ 31928431 (-) | True | G1800339 |
| TU2060159 | lncRNA | upstream | 21996 | 31941989 ~ 31942454 (-) | True | G1800346 |
| TU2060160 | lncRNA | upstream | 22465 | 31942458 ~ 31943250 (-) | True | G1800347 |
| TU2060256 | lncRNA | upstream | 152510 | 32072503 ~ 32088285 (-) | False | G1800437 |
| TU2060263 | lncRNA | upstream | 161848 | 32081841 ~ 32082502 (-) | True | G1800440 |
| XM_036959125.1 | mRNA | downstream | 145522 | 31736087 ~ 31774012 (-) | True | itga4 |
| XM_036959124.1 | mRNA | downstream | 145525 | 31736087 ~ 31774009 (-) | False | itga4 |
| XM_021579532.2 | mRNA | downstream | 300929 | 31572817 ~ 31618605 (-) | False | itprid2 |
| XR_005038820.1 | mRNA | downstream | 300929 | 31572817 ~ 31618605 (-) | True | itprid2 |
| XM_021579533.2 | mRNA | downstream | 321815 | 31572817 ~ 31597719 (-) | False | itprid2 |
| XM_021579538.2 | mRNA | upstream | 24581 | 31944574 ~ 31998145 (-) | False | ube2e3 |
| XM_036959126.1 | mRNA | upstream | 24581 | 31944574 ~ 31998179 (-) | False | ube2e3 |
| XM_021579537.2 | mRNA | upstream | 24581 | 31944574 ~ 31998351 (-) | True | ube2e3 |
| XR_005038822.1 | mRNA | upstream | 258649 | 32178642 ~ 32179005 (-) | False | LOC118943602 |
| XM_021579601.2 | mRNA | upstream | 935966 | 32855959 ~ 32882104 (-) | True | LOC110501778 |
| TU2058841 | other | downstream | 877318 | 31039193 ~ 31042216 (-) | True | LOC110501748 |
| TU2058850 | other | downstream | 924232 | 30976894 ~ 30995302 (-) | True | G1799132 |
| TU2058911 | other | downstream | 956000 | 30961087 ~ 30963534 (-) | False | LOC110502090 |
| TU2058912 | other | downstream | 956000 | 30961087 ~ 30963534 (-) | True | LOC110502090 |
| TU2058565 | other | downstream | 1399862 | 30486989 ~ 30519672 (-) | True | G1798869 |
| TU2061092 | other | upstream | 783807 | 32703800 ~ 32704323 (-) | True | G1801195 |
| TU2060961 | other | upstream | 839865 | 32759858 ~ 32777777 (-) | True | G1801071 |
| TU2061278 | other | upstream | 1030474 | 32950467 ~ 32953670 (-) | True | G1801352 |
| TU2061248 | other | upstream | 1038329 | 32958322 ~ 32960485 (-) | False | G1801331 |
| TU2063359 | other | upstream | 2598513 | 34518506 ~ 34540173 (-) | True | bard1 |
