RNA id: TU2063059



Basic Information


Item Value
RNA id TU2063059
length 216
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G1803052
representative True

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 34422467 ~ 34422682 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


atatacactgctcaaaaaaataaagggaacacttaaacaacacaatgtaactccaagtcaatcacacttctgtgaaatcaaactgtccacttaggaagcaacactgattgacaataaagttcacatgttcttgtgcaaatggaatagacaacaggtggaaattataggcaattagcaagacacccccaataaaggagtggttctgcaggtggtgac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2063042 lncRNA downstream 12269 34409923 ~ 34410198 (-) True G1803035
TU2063035 lncRNA downstream 20812 34401431 ~ 34401655 (-) True G1803028
TU2063034 lncRNA downstream 21473 34400776 ~ 34400994 (-) True G1803027
TU2063022 lncRNA downstream 29408 34392835 ~ 34393059 (-) True G1803015
TU2063018 lncRNA downstream 31818 34390273 ~ 34390649 (-) True G1803011
TU2063086 lncRNA upstream 23652 34446334 ~ 34446667 (-) True G1803079
TU2063098 lncRNA upstream 32125 34454807 ~ 34455027 (-) True G1803089
TU2063399 lncRNA upstream 146940 34569622 ~ 34569874 (-) True G1803350
TU2063378 lncRNA upstream 160883 34583565 ~ 34584030 (-) True G1803329
TU2063442 lncRNA upstream 217290 34639972 ~ 34657362 (-) True G1803393
XM_036959165.1 mRNA downstream 438965 33951053 ~ 33983502 (-) True LOC110502093
XM_036959164.1 mRNA downstream 439170 33951053 ~ 33983297 (-) False LOC110502093
XM_036959166.1 mRNA downstream 439170 33951053 ~ 33983297 (-) False LOC110502093
XM_021579613.2 mRNA downstream 494535 33687182 ~ 33927932 (-) True LOC110501786
XM_036959591.1 mRNA downstream 790289 33497664 ~ 33632178 (-) True LOC118936582
XM_036959169.1 mRNA upstream 50938 34473620 ~ 34544232 (-) False bard1
XM_036959167.1 mRNA upstream 83857 34506539 ~ 34544205 (-) False bard1
XM_036959168.1 mRNA upstream 83857 34506539 ~ 34544205 (-) False bard1
XM_021579616.2 mRNA upstream 83857 34506539 ~ 34544232 (-) False bard1
XM_021579617.2 mRNA upstream 163018 34585700 ~ 34592688 (-) True LOC110501791
TU2061248 other downstream 1461982 32958322 ~ 32960485 (-) False G1801331
TU2061278 other downstream 1468797 32950467 ~ 32953670 (-) True G1801352
TU2060961 other downstream 1644690 32759858 ~ 32777777 (-) True G1801071
TU2061092 other downstream 1718144 32703800 ~ 32704323 (-) True G1801195
TU2058841 other downstream 3380251 31039193 ~ 31042216 (-) True LOC110501748
TU2063359 other upstream 95824 34518506 ~ 34540173 (-) True bard1
TU2064031 other upstream 703797 35126479 ~ 35126833 (-) True G1803964
TU2064375 other upstream 784781 35207463 ~ 35219699 (-) True LOC110502094
TU2066167 other upstream 1635162 36057844 ~ 36059768 (-) True G1805927
TU2066409 other upstream 2155066 36577748 ~ 36578711 (-) True LOC110501806

Expression Profile