RNA id: TU2063444



Basic Information


Item Value
RNA id TU2063444
length 254
lncRNA type intronic
GC content 0.43
exon number 2
gene id G1803395
representative True

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 34644638 ~ 34651986 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gagtgactctttgtagtttttaagaaaggtagagtccatcccaaacacatctttggctttagagttctttagtgagctaatcaccttgttcacctttgactcagaaacctcccttatgatgaagacaggttgagtgtcattcactagcactgagcccaagaaacaagtggaggggttctgtgtcagtgccctgacagagtcaataaagtaggaattgaaggctattgctatttcgactgcatcctgtgttagat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2063378 lncRNA downstream 60608 34583565 ~ 34584030 (-) True G1803329
TU2063399 lncRNA downstream 74764 34569622 ~ 34569874 (-) True G1803350
TU2063098 lncRNA downstream 189611 34454807 ~ 34455027 (-) True G1803089
TU2063086 lncRNA downstream 197971 34446334 ~ 34446667 (-) True G1803079
TU2063059 lncRNA downstream 221956 34422467 ~ 34422682 (-) True G1803052
TU2063448 lncRNA upstream 17853 34669839 ~ 34671292 (-) True G1803399
TU2063449 lncRNA upstream 19383 34671369 ~ 34672336 (-) True G1803400
TU2063491 lncRNA upstream 107929 34759915 ~ 34768728 (-) True G1803441
TU2063546 lncRNA upstream 136566 34788552 ~ 34790496 (-) True G1803492
TU2063577 lncRNA upstream 171727 34823713 ~ 34824011 (-) True G1803522
XM_021579617.2 mRNA downstream 51950 34585700 ~ 34592688 (-) True LOC110501791
XM_036959169.1 mRNA downstream 100406 34473620 ~ 34544232 (-) False bard1
LOC110502094 mRNA upstream 486344 35138330 ~ 35471205 (-) False LOC110502094
XM_021579628.2 mRNA upstream 1045600 35697586 ~ 35738804 (-) True LOC110501794
XM_036959179.1 mRNA upstream 1441202 36093188 ~ 36102895 (-) False tfcp2l1
XM_036959177.1 mRNA upstream 1441207 36093193 ~ 36102895 (-) True tfcp2l1
XM_036959193.1 mRNA upstream 1454061 36106047 ~ 36217789 (-) False LOC110502096
TU2063359 other downstream 104465 34518506 ~ 34540173 (-) True bard1
TU2061248 other downstream 1684153 32958322 ~ 32960485 (-) False G1801331
TU2061278 other downstream 1690968 32950467 ~ 32953670 (-) True G1801352
TU2060961 other downstream 1866861 32759858 ~ 32777777 (-) True G1801071
TU2061092 other downstream 1940315 32703800 ~ 32704323 (-) True G1801195
TU2064031 other upstream 474493 35126479 ~ 35126833 (-) True G1803964
TU2064375 other upstream 555477 35207463 ~ 35219699 (-) True LOC110502094
TU2066167 other upstream 1405858 36057844 ~ 36059768 (-) True G1805927
TU2066409 other upstream 1925762 36577748 ~ 36578711 (-) True LOC110501806
TU2066670 other upstream 2283672 36935658 ~ 36936087 (-) True G1806393

Expression Profile