RNA id: TU2205326


Basic Information

Item Value
RNA id TU2205326
length 252
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G1928432
representative False

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 36668045 ~ 36668382 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

agagagagagagagagagagagagagacagagacagagagagagacagagagagagagagagagacagagacagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagacagagagagagagagagagagagagacagagagagacagagagagacagagacagagagagagagag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2205298 lncRNA upstream 67460 36599239 ~ 36600585 (+) False G1928408
TU2205299 lncRNA upstream 68489 36599239 ~ 36599556 (+) True G1928408
TU2205284 lncRNA upstream 96219 36570605 ~ 36571826 (+) True G1928398
TU2205280 lncRNA upstream 102695 36562217 ~ 36565350 (+) True G1928396
TU2205276 lncRNA upstream 125547 36542119 ~ 36542498 (+) True G1928392
TU2205329 lncRNA downstream 4286 36672668 ~ 36672898 (+) True G1928434
TU2205348 lncRNA downstream 26246 36694628 ~ 36694887 (+) True G1928446
TU2205360 lncRNA downstream 57932 36726314 ~ 36727143 (+) True G1928456
TU2205366 lncRNA downstream 73438 36741820 ~ 36742384 (+) True G1928458
TU2205331 lncRNA downstream 83675 36752057 ~ 36752666 (+) True G1928436
XM_036961766.1 mRNA upstream 107309 36541464 ~ 36560736 (+) False LOC110503243
XM_036961765.1 mRNA upstream 112445 36541464 ~ 36555600 (+) False LOC110503243
XM_036961763.1 mRNA upstream 112684 36541463 ~ 36555361 (+) False LOC110503243
XM_036961764.1 mRNA upstream 112684 36541603 ~ 36555361 (+) True LOC110503243
XM_036961674.1 mRNA upstream 155561 36505888 ~ 36512484 (+) True bud23
XM_036961183.1 mRNA downstream 5440 36673822 ~ 36749629 (+) False LOC110503266
XM_036961182.1 mRNA downstream 5444 36673826 ~ 36749629 (+) False LOC110503266
XM_036961185.1 mRNA downstream 5447 36673829 ~ 36749629 (+) False LOC110503266
XM_036961186.1 mRNA downstream 5448 36673830 ~ 36749629 (+) False LOC110503266
XM_021581638.2 mRNA downstream 5453 36673835 ~ 36749629 (+) False LOC110503266
TU2205324 other upstream 5548 36661874 ~ 36662497 (+) True G1928430
TU2204948 other upstream 497574 36141229 ~ 36170471 (+) False G1928169
TU2204947 other upstream 497574 36169416 ~ 36170471 (+) True G1928169
TU2204967 other upstream 498716 36167389 ~ 36169329 (+) False G1928170
TU2204953 other upstream 498759 36166626 ~ 36169286 (+) False G1928170
TU2205478 other downstream 389624 37058006 ~ 37063544 (+) True LOC110503264
TU2205555 other downstream 505224 37173606 ~ 37183522 (+) True urb1
TU2205476 other downstream 533477 37201859 ~ 37203186 (+) True LOC110503265
TU2205616 other downstream 623280 37291662 ~ 37292416 (+) False LOC110503436
TU2205711 other downstream 766521 37434903 ~ 37435441 (+) True G1928752

Expression Profile