RNA id: XM_021588535.2



Basic Information


Item Value
RNA id XM_021588535.2
length 1217
RNA type mRNA
GC content 0.43
exon number 3
gene id tmem97
representative True

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 43556576 ~ 43558533 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CAAAAGGGCCAATAGAATCGAACCATTCAACGTGCGCTGCCACGACACTAGCCCATCCCCCTTTTCCTTCAACGTTGGGAAATTCGCATGCGTTCTCGATAACATCTAAATTAAAGCTTAGAGATAGCTGTTTATATTGCTGGTGTATCTTTCATTTGATTCAATATGGGTATCCTTCGTATATTAGAAATTATATTTGTCTTTTATTTTGCTTCTCACATTCCTATTACATTATTCATTGATCTTCAAGCGTTGCTTCCTGCGCAGATGTATCCTCAACAGCTGAAAGATGTTTTGAGATGGTATGGGGCTGAGTTCAGAGACCCCATGATGCTGGATCCCCCCACCTGGTTCAAGTCCTTCATCTTCTGCGAAGCTCTGGTTCAAACACCCTTCTTCCCCATAGCTGCATACGCCTTCCTGAAAGGAGGCTGCAAGTGGATCAGGACTCCGGCCATTGTGTATTCCACCCACGTAGTCACCACCCTGGTCCCCATCCTAGCCCACATCCTCTACTACACCTTCCCCACAGAGCCCCACCCTGGTCCCCAGACCCAGAAGGAGCGTTACACCCTGGCAGCTATTTACGCTCCGTACCTCCTGATTCCTCTGATGCTGCTGTTCACAATGCTCTTCAGCTCAGCTTACAACACCAACACTCAGGGAGGAAAGGGCTCAGCTAAGGCCAAGAAGAGCAAATAAAAGACACTCATttctagcctgagtgccagtctgtttgtgctattgTCCAACTCCATTGCTGTCCTTGTCACCTGTTTGGTTTTTGATGGCACAAACAGATTGGCACTCGGGCTACTAATCCACCTGTACATTCTGTAATACACTGTACTGTGTTACCCAGCGGTCTGTCCAGGCGATCATACCTCTTAGTCTACAGTATTCATTTTCAgtgatttttttctctccctcttctcctcaaGTGATGAATTGTCAATTGGTACATTTCAAGTCAATAAAACATCATAGGTACGTTAAACATTCTTAACAATTCATATTGTTTTGATCATCACAGATTAGCAATAGTCAAGAATATTGGACACCCAAGAGAATCAAAATGTGCAAATCCTTTTTTATTTCAAGTATATCTCATCTTTTGATGAAGTTGGTCCACTAAGTTGGTTTACTAACTTTTAACATGGATAAGATGAATGCAGAGGAGGATGATATTTACTGTAAACATAAAATAATATACCTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2384886 lncRNA downstream 2547 43549267 ~ 43554070 (-) True G2085499
TU2384931 lncRNA downstream 12225 43542434 ~ 43544392 (-) True G2085533
TU2384929 lncRNA downstream 13775 43541942 ~ 43542842 (-) True G2085532
TU2384924 lncRNA downstream 23967 43532282 ~ 43532650 (-) True G2085527
TU2384906 lncRNA downstream 49500 43501034 ~ 43507117 (-) True G2085513
TU2384955 lncRNA upstream 26834 43585367 ~ 43585898 (-) True G2085557
TU2384956 lncRNA upstream 28273 43586806 ~ 43587089 (-) True G2085558
TU2384960 lncRNA upstream 37517 43596050 ~ 43596967 (-) True G2085562
TU2384974 lncRNA upstream 61983 43620516 ~ 43636334 (-) False G2085571
TU2384976 lncRNA upstream 61983 43620516 ~ 43637291 (-) True G2085571
LOC110508094 mRNA downstream 7413 43535555 ~ 43549204 (-) True LOC110508094
XM_036965644.1 mRNA downstream 27270 43295811 ~ 43529347 (-) False LOC110519585
XM_036965645.1 mRNA downstream 27270 43295811 ~ 43529347 (-) False LOC110519585
XM_036965667.1 mRNA downstream 906716 42647144 ~ 42649901 (-) False LOC118944772
XM_021588507.2 mRNA downstream 992037 42561570 ~ 42564580 (-) True LOC110508058
XR_005039946.1 mRNA upstream 178537 43737070 ~ 43743473 (-) False LOC110508089
XR_005039948.1 mRNA upstream 178537 43737070 ~ 43762873 (-) False LOC110508089
XM_036964666.1 mRNA upstream 180376 43738909 ~ 43743473 (-) False LOC110508089
XM_036964667.1 mRNA upstream 180376 43738909 ~ 43743473 (-) False LOC110508089
XM_036964668.1 mRNA upstream 180376 43738909 ~ 43743473 (-) False LOC110508089
TU2383921 other downstream 771582 42784627 ~ 42785035 (-) True G2084740
TU2382643 other downstream 1875925 41676251 ~ 41680692 (-) True LOC118944786
TU2382642 other downstream 1875977 41676251 ~ 41680640 (-) False LOC118944786
TU2382641 other downstream 1876083 41676251 ~ 41680534 (-) False LOC118944786
TU2382371 other downstream 2132577 41423539 ~ 41424040 (-) True G2083443
TU2385185 other upstream 353627 43912160 ~ 43912680 (-) True G2085726
TU2386614 other upstream 1362376 44920909 ~ 44921312 (-) True G2086783
TU2386975 other upstream 1971823 45530356 ~ 45530780 (-) True G2087090
TU2387219 other upstream 2238537 45797070 ~ 45798330 (-) True G2087288
TU2388664 other upstream 3414048 46972581 ~ 46975108 (-) True ndufc2

Expression Profile