RNA id: TU2332433


Basic Information

Item Value
RNA id TU2332433
length 231
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G2038793
representative True

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 124270 ~ 124500 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gattgattgaatatgtccgtaaacacaccggccagctggtctgcgcatgctctgagggcgcggctggggatgccgtctgggcctgcagccttgcgagggttaacacgtttaaatgtcttgctcacctcggctgcagtgaaggagagaccgcatgttttcgttgcaggccgtcctcaaagcgggcaaaaaagtaatttagtctgcctgggagcaagacatcctggtccgtga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2332111 lncRNA downstream 81891 37589 ~ 42379 (-) True G2038501
TU2332435 lncRNA upstream 10481 134981 ~ 135269 (-) True G2038795
TU2332454 lncRNA upstream 42888 167388 ~ 202116 (-) False G2038798
TU2332457 lncRNA upstream 42888 167388 ~ 202116 (-) False G2038798
TU2332450 lncRNA upstream 57555 182055 ~ 190233 (-) False G2038798
TU2332459 lncRNA upstream 58537 183037 ~ 190233 (-) False G2038798
XM_021587173.2 mRNA upstream 93815 218315 ~ 299102 (-) False LOC110507290
XM_021587172.2 mRNA upstream 93815 218315 ~ 305904 (-) True LOC110507290
XM_036964863.1 mRNA upstream 331552 456052 ~ 470550 (-) False LOC110507294
XM_036964859.1 mRNA upstream 331554 456054 ~ 470305 (-) False LOC110507294
XM_036964856.1 mRNA upstream 331554 456054 ~ 470550 (-) False LOC110507294
TU2333132 other upstream 645474 769974 ~ 770737 (-) True LOC110507298
TU2335902 other upstream 2771076 2895576 ~ 2896391 (-) True G2041883
TU2335904 other upstream 2774487 2898987 ~ 2899388 (-) True G2041885
TU2336713 other upstream 3276079 3400579 ~ 3402997 (-) True G2042608
TU2336663 other upstream 3414684 3539184 ~ 3541753 (-) True LOC110507356

Expression Profile