RNA id: TU2332475


Basic Information

Item Value
RNA id TU2332475
length 472
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G2038808
representative True

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 210106 ~ 210577 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TCTATAGACTCCATCATGAAGTTGACGGCTCTCCTGCCTGAAGTCTCTCTTACTCCAGAACACGTCTTCATGGTGTATGGAGCAGAGTTGTCATCGATGTTGAAGAGATTGAAAAACTCTGTCTTGGCCAGAGATTTGTGACTCTGTTCATCAAGCACTACATACATTTTGACAGCTTTCTCTCTTTTCCCAGCTGGATAAGCTTTGACTAGGCATATTTTTGAAAATGACCTAGGATTGACTGCCTCACCACAGATCTCCGTACACTTTGAAATGACAGATAGAAGAGCATCGTTACCTTGCTCCCCGCCATGGTCTGTCTCTGCTGTAGCGGTGTCTGTATTTGTAGGGGCTGGGCCTGGATGCAGAGCAGCAAGATGCCTGTCGCTGTCGCACTCAGAGCACTTGATTGAAACCTTACAGTCTTTAGCTCTGTGCTGAGTTGACCCACAACATTGGAAACAAATGCCAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2332454 lncRNA downstream 7990 167388 ~ 202116 (-) False G2038798
TU2332457 lncRNA downstream 7990 167388 ~ 202116 (-) False G2038798
TU2332450 lncRNA downstream 19873 182055 ~ 190233 (-) False G2038798
TU2332459 lncRNA downstream 19873 183037 ~ 190233 (-) False G2038798
TU2332453 lncRNA downstream 19873 187249 ~ 190233 (-) True G2038798
TU2332476 lncRNA upstream 10 210587 ~ 211311 (-) True G2038809
TU2332578 lncRNA upstream 212470 423047 ~ 426644 (-) True G2038909
TU2332733 lncRNA upstream 401241 611818 ~ 612167 (-) True G2039032
TU2333194 lncRNA upstream 567199 777776 ~ 777993 (-) True G2039458
TU2333196 lncRNA upstream 603890 814467 ~ 816586 (-) True defb4
XM_021587173.2 mRNA upstream 7738 218315 ~ 299102 (-) False LOC110507290
XM_021587172.2 mRNA upstream 7738 218315 ~ 305904 (-) True LOC110507290
XM_036964863.1 mRNA upstream 245475 456052 ~ 470550 (-) False LOC110507294
XM_036964859.1 mRNA upstream 245477 456054 ~ 470305 (-) False LOC110507294
XM_036964856.1 mRNA upstream 245477 456054 ~ 470550 (-) False LOC110507294
TU2333132 other upstream 559397 769974 ~ 770737 (-) True LOC110507298
TU2335902 other upstream 2684999 2895576 ~ 2896391 (-) True G2041883
TU2335904 other upstream 2688410 2898987 ~ 2899388 (-) True G2041885
TU2336713 other upstream 3190002 3400579 ~ 3402997 (-) True G2042608
TU2336663 other upstream 3328607 3539184 ~ 3541753 (-) True LOC110507356

Expression Profile