RNA id: TU2332476


Basic Information

Item Value
RNA id TU2332476
length 725
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G2038809
representative True

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 210587 ~ 211311 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TCCAGCATCTTTTGCATGAAGTCAATAAAATTACGCTTCATGTCAGGCTTTTTGTCTAAAGTCCTGCGAAGTGATGCGAGGCGGTTCATGGCCTGCTCCCTGTTATTAGGGAGGCGACGTCTAGTGGGGCGAAAGGGTAGTGGAGCCACCCAGTTGTTTCCATCATCCTGGAAAAcctgtttgtccataatgtccaAGAATGCTTTGTCCTCCACTGATGGTGCTGGTTTATCATCGTTTTGTCGAACACGGAACATCCCAGGCTGTCTATGTTTACAGTTGTGATTGGATCTCTTGAGTGCACTGTAGAGGGAGAGATGTGTTTCTGAGCTACGCTGTTGTAGTTCTCTTTTACCTGGATGATGTCAGGGCAAGGGCTCAGATAGGATGTGCGACCATTTTGAAGTATGTTTGTCCTGAACACGTTAACATTGGCTGGTCGGTGAGCCGTTCCCAGACAGACCTCACCTACGATGACCCACCCGAGGTCGAGTCACTGTGCATAAGGAGTGTCGTGGGGCCCATTGATTTGCCCTCGTACCTTGTGTACCCTTAAGATGTTTCATCCTAAGAGCAGGAGGATGGGAGCGTCTGGGTCCACAGCTGGAATTTTGTCCATAACTGGTTGCAGATGGGGATGATGATACGCAATGTCGTGGGAGGGAATCTCCATCCTATCGTCTGGCATCATATCACACTCTATCAGAGTAGGGAGAATGAGCTGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2332475 lncRNA downstream 10 210106 ~ 210577 (-) True G2038808
TU2332454 lncRNA downstream 8471 167388 ~ 202116 (-) False G2038798
TU2332457 lncRNA downstream 8471 167388 ~ 202116 (-) False G2038798
TU2332450 lncRNA downstream 20354 182055 ~ 190233 (-) False G2038798
TU2332459 lncRNA downstream 20354 183037 ~ 190233 (-) False G2038798
TU2332578 lncRNA upstream 211736 423047 ~ 426644 (-) True G2038909
TU2332733 lncRNA upstream 400507 611818 ~ 612167 (-) True G2039032
TU2333194 lncRNA upstream 566465 777776 ~ 777993 (-) True G2039458
TU2333196 lncRNA upstream 603156 814467 ~ 816586 (-) True defb4
TU2333259 lncRNA upstream 637641 848952 ~ 851621 (-) False G2039501
XM_021587173.2 mRNA upstream 7004 218315 ~ 299102 (-) False LOC110507290
XM_021587172.2 mRNA upstream 7004 218315 ~ 305904 (-) True LOC110507290
XM_036964863.1 mRNA upstream 244741 456052 ~ 470550 (-) False LOC110507294
XM_036964859.1 mRNA upstream 244743 456054 ~ 470305 (-) False LOC110507294
XM_036964856.1 mRNA upstream 244743 456054 ~ 470550 (-) False LOC110507294
TU2333132 other upstream 558663 769974 ~ 770737 (-) True LOC110507298
TU2335902 other upstream 2684265 2895576 ~ 2896391 (-) True G2041883
TU2335904 other upstream 2687676 2898987 ~ 2899388 (-) True G2041885
TU2336713 other upstream 3189268 3400579 ~ 3402997 (-) True G2042608
TU2336663 other upstream 3327873 3539184 ~ 3541753 (-) True LOC110507356

Expression Profile