RNA id: TU2382371


Basic Information

Item Value
RNA id TU2382371
length 502
RNA type TUCP
GC content 0.53
exon number 1
gene id G2083443
representative True

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 41423539 ~ 41424040 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ctgttttaggttttcgttacgttcatcacgttctttattttgtagtgtttgcattgattcgtgttttacgtttgttcattaaaacatggatcgcaatctacacgctgcattttggtccgactctccttcacatacagaaaaccgttacagaatcacccaccacaaagggaccaagcagcgtgtcaacaggcaggagcagcgcgaggagatgcgcaataaggatttctggacatgggaggaaatcctcgacgggagaggaccctgggctaaaccaggggagtgtagccgcccaaaggtgcagcgagagaagaaacaacaggcgcagcccaaagaggagtacagtatggagtatacgacttgggaggagatcgacaggtgggcggccgacccagggagagtgccggagcccgcctgggattcgatggagcagtgcgcggaaggatataggagaatggagtttgcgaagcaagcaaggcggcgcggacggaggccccatagtcac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2382355 lncRNA downstream 27462 41395619 ~ 41396077 (-) True G2083427
TU2382354 lncRNA downstream 27610 41395619 ~ 41395929 (-) False G2083427
TU2382292 lncRNA downstream 83389 41339895 ~ 41340150 (-) True G2083377
TU2382283 lncRNA downstream 91516 41331807 ~ 41332023 (-) True G2083368
TU2382279 lncRNA downstream 95034 41328285 ~ 41328505 (-) True G2083364
TU2382372 lncRNA upstream 852 41424892 ~ 41425200 (-) True G2083444
TU2382374 lncRNA upstream 2372 41426412 ~ 41426930 (-) True G2083446
TU2382377 lncRNA upstream 3603 41427643 ~ 41427923 (-) True G2083449
TU2382435 lncRNA upstream 51471 41475511 ~ 41475755 (-) True G2083504
TU2382439 lncRNA upstream 56725 41480765 ~ 41481545 (-) True G2083508
XM_036964883.1 mRNA downstream 10247 41362562 ~ 41413292 (-) True LOC110508054
XM_036964884.1 mRNA downstream 10250 41362562 ~ 41413289 (-) False LOC110508054
XM_036964885.1 mRNA downstream 26696 41362562 ~ 41396843 (-) False LOC110508054
XM_021587165.2 mRNA downstream 109829 41309176 ~ 41313710 (-) False LOC110507281
XM_021587164.2 mRNA downstream 136110 41282753 ~ 41287429 (-) True LOC110507280
XM_036965863.1 mRNA upstream 149371 41573411 ~ 41680787 (-) False LOC118944786
XR_005040101.1 mRNA upstream 149371 41573411 ~ 41680787 (-) False LOC118944786
XR_005040102.1 mRNA upstream 149371 41573411 ~ 41680787 (-) False LOC118944786
XR_005040103.1 mRNA upstream 149371 41573411 ~ 41680787 (-) False LOC118944786
XM_036965864.1 mRNA upstream 149371 41573411 ~ 41680789 (-) False LOC118944786
TU2381883 other downstream 448332 40974709 ~ 40975207 (-) True LOC110508045
TU2381830 other downstream 542302 40880845 ~ 40881237 (-) True LOC110507273
TU2381609 other downstream 801845 40620620 ~ 40621694 (-) False LOC110508038
TU2381445 other downstream 1235974 40158077 ~ 40187565 (-) True lekr1
TU2380639 other downstream 1750086 39672732 ~ 39673453 (-) True G2082006
TU2382641 other upstream 252211 41676251 ~ 41680534 (-) False LOC118944786
TU2382642 other upstream 252211 41676251 ~ 41680640 (-) False LOC118944786
TU2382643 other upstream 252211 41676251 ~ 41680692 (-) True LOC118944786
TU2383921 other upstream 1360587 42784627 ~ 42785035 (-) True G2084740
TU2385185 other upstream 2488120 43912160 ~ 43912680 (-) True G2085726

Expression Profile