RNA id: TU2383921



Basic Information


Item Value
RNA id TU2383921
length 361
RNA type TUCP
GC content 0.64
exon number 2
gene id G2084740
representative True

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 42784627 ~ 42785035 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AGGTTGTTATCAGTCAGCACCTCCTTGACCTTCTTGGTGAGGACGTATGTGTCCAGCTCAGGAGACATGGCTATCGTCTCCTGGATGCTGAGGCCTGTGATGGGGCCAGGGAGTGGCAGGGGCGTACCGGGCTGGGACTCTCCCCCTGAGGGCTCACCAGATGGGGGCTCCAGAGACGGGGCCTGGGGGGCCAGAGGGTCCCGGTCGCCCCCTAAACCATTGAGTGACTCCTCAGCAGAGCTCAGTGGAGACCCTGGAGGAGGGCTGCAGCTGGCTGAGGTCTGGCTGGGAGTGCCCTCTGCTGGGGCAGGGCTGCAGCTGGCTGAGGTCTGGCCCTCTGCTAGAGGAGAGAAAACGCAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2383904 lncRNA downstream 40364 42743491 ~ 42744263 (-) True G2084725
TU2383903 lncRNA downstream 40527 42743491 ~ 42744100 (-) False G2084725
TU2383893 lncRNA downstream 68327 42716007 ~ 42716300 (-) True G2084715
TU2383856 lncRNA downstream 118254 42666115 ~ 42666373 (-) True G2084685
TU2383629 lncRNA downstream 134076 42649934 ~ 42650551 (-) True G2084505
TU2383866 lncRNA upstream 31918 42816953 ~ 42817378 (-) True G2084690
TU2383937 lncRNA upstream 34588 42819623 ~ 42819834 (-) True G2084753
TU2383975 lncRNA upstream 96600 42881635 ~ 42881987 (-) False G2084783
TU2383976 lncRNA upstream 96600 42881635 ~ 42881987 (-) True G2084783
TU2383982 lncRNA upstream 103014 42888049 ~ 42890411 (-) True G2084787
XM_036965667.1 mRNA downstream 134726 42647144 ~ 42649901 (-) False LOC118944772
XM_021588507.2 mRNA downstream 220047 42561570 ~ 42564580 (-) True LOC110508058
XM_036965653.1 mRNA downstream 244287 42516527 ~ 42540340 (-) False neu4
XM_036965261.1 mRNA downstream 499082 42262030 ~ 42285545 (-) True aadac
XM_036965205.1 mRNA downstream 677463 41926917 ~ 42107164 (-) False LOC110508063
XM_036965644.1 mRNA upstream 510776 43295811 ~ 43529347 (-) False LOC110519585
XM_036965645.1 mRNA upstream 510776 43295811 ~ 43529347 (-) False LOC110519585
LOC110508094 mRNA upstream 750520 43535555 ~ 43549204 (-) True LOC110508094
XM_036965671.1 mRNA upstream 771541 43556576 ~ 43558533 (-) False tmem97
XM_021588535.2 mRNA upstream 771582 43556617 ~ 43558533 (-) True tmem97
TU2382643 other downstream 1103935 41676251 ~ 41680692 (-) True LOC118944786
TU2382642 other downstream 1103987 41676251 ~ 41680640 (-) False LOC118944786
TU2382641 other downstream 1104093 41676251 ~ 41680534 (-) False LOC118944786
TU2382371 other downstream 1360587 41423539 ~ 41424040 (-) True G2083443
TU2381883 other downstream 1809420 40974709 ~ 40975207 (-) True LOC110508045
TU2385185 other upstream 1127125 43912160 ~ 43912680 (-) True G2085726
TU2386614 other upstream 2135874 44920909 ~ 44921312 (-) True G2086783
TU2386975 other upstream 2745321 45530356 ~ 45530780 (-) True G2087090
TU2387219 other upstream 3012035 45797070 ~ 45798330 (-) True G2087288
TU2388664 other upstream 4187546 46972581 ~ 46975108 (-) True ndufc2

Expression Profile