RNA id: TU2570139



Basic Information


Item Value
RNA id TU2570139
length 514
RNA type TUCP
GC content 0.51
exon number 1
gene id G2247416
representative True

Chromosome Information


Item Value
chromosome id NC_050571.1
NCBI id CM025858.1
chromosome length 44108611
location 6870587 ~ 6871100 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gggtcacagtcactagacatatctcctgggtcacagccactagacatgtctcctgggtcacagtcactagacatgtctcctgggtcacagtcacgagacatgtctcctgggtcacagtcactagacatatctcctgggtcacagtcactagacatatctcctgggtcacagtcacgagacatgtctcctgggtcacagtcactagacatgtctcctgggtcacagtcactagacatgtctcctgggtcacagtcactagacatatcgcctgggtcacagtcacgagacatatctcctgggtcacagtcactagacatgtctcctggttcacagtcactagacatatctcctgggtcacagtcactagacatgtctcctgggtcacagtcactagatatatctcctgggtcacagtcactagacatgtctcctgggtcacagtcactagacatatctcctgggtcacagtcacgagacatatctcctgggtcacagtcactagacatgtctcctg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2570102 lncRNA downstream 38388 6831938 ~ 6832199 (-) True G2247381
TU2570101 lncRNA downstream 38877 6831250 ~ 6831710 (-) True G2247380
TU2570057 lncRNA downstream 89632 6780508 ~ 6780955 (-) True G2247339
TU2570034 lncRNA downstream 124662 6745215 ~ 6745925 (-) True G2247317
TU2570007 lncRNA downstream 159893 6709849 ~ 6710694 (-) True G2247290
TU2570157 lncRNA upstream 30726 6901826 ~ 6902095 (-) True G2247432
TU2570159 lncRNA upstream 33751 6904851 ~ 6905120 (-) True G2247434
TU2570169 lncRNA upstream 38863 6909963 ~ 6910165 (-) True G2247444
TU2570185 lncRNA upstream 53065 6924165 ~ 6924791 (-) True G2247460
TU2570402 lncRNA upstream 212789 7083889 ~ 7084213 (-) True G2247650
XM_036970557.1 mRNA downstream 448158 6116114 ~ 6422429 (-) False LOC110504499
XM_021583254.2 mRNA downstream 448158 6380296 ~ 6422429 (-) False LOC110504499
XR_005041140.1 mRNA downstream 1130535 5739294 ~ 5740052 (-) True LOC118946011
XM_036969691.1 mRNA downstream 1139581 5707418 ~ 5731006 (-) False LOC110504359
XM_021583260.2 mRNA upstream 256769 7127869 ~ 7131553 (-) False LOC110504506
XM_021583259.1 mRNA upstream 256769 7127869 ~ 7138960 (-) False LOC110504506
XM_021583258.2 mRNA upstream 256769 7127869 ~ 7201500 (-) True LOC110504506
XM_036969849.1 mRNA upstream 827083 7698183 ~ 7708261 (-) False LOC110504480
XM_036969850.1 mRNA upstream 827083 7698183 ~ 7725792 (-) True LOC110504480
TU2568862 other downstream 1017988 5848119 ~ 5852599 (-) True G2246314
TU2568854 other downstream 1018385 5848119 ~ 5852202 (-) False G2246314
TU2567370 other downstream 2248597 4535841 ~ 4621990 (-) True G2245152
TU2566964 other downstream 2757586 4111702 ~ 4113001 (-) False G2244811
TU2566965 other downstream 2757586 4111702 ~ 4113001 (-) False G2244811
TU2570306 other upstream 67523 6938623 ~ 7024539 (-) False G2247565
TU2570303 other upstream 77020 6948120 ~ 7024539 (-) True G2247565
TU2570603 other upstream 384244 7255344 ~ 7255940 (-) True G2247813
TU2571450 other upstream 1169776 8040876 ~ 8041480 (-) True G2248522
TU2571633 other upstream 1282811 8153911 ~ 8157533 (-) False G2248668

Expression Profile