Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00061701 |
| length | 1171 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 3 |
| gene id | XLOC_030085 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007116.7 |
| NCBI id | CM002889.2 |
| chromosome length | 72500376 |
| location | 25311263 ~ 25314752 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0044424 | obsolete intracellular part | cellular_component |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0043226 | organelle | cellular_component |
| GO:0043227 | membrane-bounded organelle | cellular_component |
| GO:0043229 | intracellular organelle | cellular_component |
| GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00061434 | lncRNA | upstream | 61587 | 25248198 ~ 25249676 (+) | True | XLOC_030083 |
| TCONS_00061700 | lncRNA | upstream | 431698 | 24873805 ~ 24879565 (+) | True | XLOC_030079 |
| TCONS_00061699 | lncRNA | upstream | 475946 | 24816325 ~ 24835317 (+) | True | XLOC_030078 |
| TCONS_00058822 | lncRNA | upstream | 750088 | 24557130 ~ 24561175 (+) | True | XLOC_030077 |
| TCONS_00058821 | lncRNA | upstream | 754438 | 24552423 ~ 24556825 (+) | False | XLOC_030077 |
| TCONS_00061702 | lncRNA | downstream | 386274 | 25701025 ~ 25710432 (+) | True | XLOC_030090 |
| TCONS_00058864 | lncRNA | downstream | 914467 | 26229218 ~ 26233068 (+) | True | XLOC_030104 |
| TCONS_00061435 | lncRNA | downstream | 1164923 | 26479674 ~ 26481301 (+) | True | XLOC_030106 |
| TCONS_00058869 | lncRNA | downstream | 1450490 | 26765241 ~ 26767712 (+) | False | XLOC_030109 |
| TCONS_00058885 | lncRNA | downstream | 1581283 | 26896034 ~ 26899985 (+) | False | XLOC_030114 |
| TCONS_00058828 | mRNA | upstream | 1714 | 25304499 ~ 25309549 (+) | True | XLOC_030084 |
| TCONS_00058826 | mRNA | upstream | 223971 | 25084385 ~ 25087292 (+) | False | XLOC_030082 |
| TCONS_00058827 | mRNA | upstream | 224074 | 25084410 ~ 25087189 (+) | True | XLOC_030082 |
| TCONS_00058824 | mRNA | upstream | 236084 | 25072894 ~ 25075179 (+) | False | XLOC_030081 |
| TCONS_00058825 | mRNA | upstream | 236206 | 25074648 ~ 25075057 (+) | True | XLOC_030081 |
| TCONS_00058830 | mRNA | downstream | 2310 | 25317061 ~ 25358683 (+) | True | XLOC_030086 |
| TCONS_00058831 | mRNA | downstream | 271118 | 25585869 ~ 25587613 (+) | True | XLOC_030087 |
| TCONS_00058832 | mRNA | downstream | 281483 | 25596234 ~ 25605668 (+) | False | XLOC_030088 |
| TCONS_00058833 | mRNA | downstream | 281487 | 25596238 ~ 25605601 (+) | True | XLOC_030088 |
| TCONS_00058835 | mRNA | downstream | 366094 | 25680845 ~ 25694362 (+) | False | XLOC_030089 |
| TCONS_00058819 | other | upstream | 789513 | 24521682 ~ 24521750 (+) | True | XLOC_030076 |
| TCONS_00058808 | other | upstream | 1175694 | 24132301 ~ 24135569 (+) | False | XLOC_030066 |
| TCONS_00058805 | other | upstream | 1217396 | 24089324 ~ 24093867 (+) | False | XLOC_030065 |
| TCONS_00058803 | other | upstream | 1219916 | 24086598 ~ 24091347 (+) | False | XLOC_030065 |
| TCONS_00058790 | other | upstream | 1400814 | 23910333 ~ 23910449 (+) | True | XLOC_030058 |
| TCONS_00058834 | other | downstream | 366091 | 25680842 ~ 25682105 (+) | False | XLOC_030089 |
| TCONS_00058845 | other | downstream | 497122 | 25811873 ~ 25812239 (+) | True | XLOC_030092 |
| TCONS_00058848 | other | downstream | 657317 | 25972068 ~ 25972160 (+) | True | XLOC_030094 |
| TCONS_00058859 | other | downstream | 897881 | 26212632 ~ 26220157 (+) | False | XLOC_030103 |
| TCONS_00058863 | other | downstream | 906265 | 26221016 ~ 26233068 (+) | False | XLOC_030104 |
