RNA id: TU2678901



Basic Information


Item Value
RNA id TU2678901
length 359
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G2339793
representative True

Chromosome Information


Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 680954 ~ 682170 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gaaattcttacttaaccaacaatgcagttctagAAGAGTTACGAAAATATTGACCaagttaacaattaaaaagtaacacaataagaataatgAGGCTAAATTCAggtggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggaggctatatacagggtattacggtacagagtcaatgtggaggctatatacagggggtaccagtacagagtcaatgtggaggctatatacagggggcaccggtacagagtcaatgtggagactatatacagggggtaccggtacagagtcaatgtggaggctatatacagggtattacggtacagagtcaatgtgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2678896 lncRNA upstream 417 680080 ~ 680537 (+) True G2339791
TU2678586 lncRNA upstream 4172 675836 ~ 676782 (+) True G2339554
TU2678578 lncRNA upstream 22792 657802 ~ 658162 (+) True G2339548
TU2678574 lncRNA upstream 23509 655481 ~ 657445 (+) True G2339547
TU2678557 lncRNA upstream 70373 608336 ~ 610581 (+) True G2339532
TU2678909 lncRNA downstream 11672 693842 ~ 694184 (+) True G2339801
TU2678928 lncRNA downstream 21766 703936 ~ 704424 (+) True G2339815
TU2678929 lncRNA downstream 23498 705668 ~ 706110 (+) True G2339816
TU2678930 lncRNA downstream 24028 706198 ~ 706486 (+) True G2339817
TU2678936 lncRNA downstream 26953 709123 ~ 710846 (+) True G2339823
XR_005041782.1 mRNA upstream 84617 595503 ~ 596337 (+) True LOC118947129
XM_036972373.1 mRNA upstream 375713 107069 ~ 305241 (+) False LOC118947131
XM_036972394.1 mRNA downstream 80409 762579 ~ 768787 (+) True LOC110495334
XM_036972370.1 mRNA downstream 129317 811487 ~ 817121 (+) False si:ch73-41e3.7
XM_036972372.1 mRNA downstream 129317 811487 ~ 817841 (+) False si:ch73-41e3.7
XR_005041785.1 mRNA downstream 129317 811487 ~ 817841 (+) False si:ch73-41e3.7
XM_036972371.1 mRNA downstream 130369 812539 ~ 817121 (+) True si:ch73-41e3.7
TU2678479 other upstream 216487 463198 ~ 464467 (+) True G2339478
TU2678285 other upstream 583098 97115 ~ 97856 (+) True G2339343
TU2678903 other downstream 1174 683344 ~ 685548 (+) True G2339795
TU2679051 other downstream 188937 871107 ~ 873839 (+) False G2339912
TU2679060 other downstream 188937 871107 ~ 873839 (+) False G2339912
TU2679067 other downstream 188937 871107 ~ 873839 (+) False G2339912
TU2679071 other downstream 188937 871107 ~ 873839 (+) False G2339912

Expression Profile