RNA id: TU2678903



Basic Information


Item Value
RNA id TU2678903
length 490
RNA type TUCP
GC content 0.45
exon number 2
gene id G2339795
representative True

Chromosome Information


Item Value
chromosome id NW_023493665.1
NCBI id JAAXML020000242.1
chromosome length 1484196
location 683344 ~ 685548 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tatatacagggtgttacggtacagagtcaatgtggagactatatacagggtattacggtacggagtcaatgtggaggctatatacagggtattacggtacagagtcaatgtggaggctatatacagggtattacggtacggagtcaatgtggaggctatatacagggggtactggtacagagtcaatgtggagactatatacagggtattacggtacggagtcaatgtggaggctatatacagggtattacggtacagagtcaatgtggaggctatatacagggtattacggtacggagtcaatgtggaggctatatacagggggtactggtacagagtcaatgtggaggctatatacagggtattacggtatagagtcaatgtggaggctatatacagggtgttatggtacagagtcaatgtggaggctatatacagggggtaccagtacagagtcaatgtggagactatatacagggtgttacggtac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2678901 lncRNA upstream 1174 680954 ~ 682170 (+) True G2339793
TU2678896 lncRNA upstream 2807 680080 ~ 680537 (+) True G2339791
TU2678586 lncRNA upstream 6562 675836 ~ 676782 (+) True G2339554
TU2678578 lncRNA upstream 25182 657802 ~ 658162 (+) True G2339548
TU2678574 lncRNA upstream 25899 655481 ~ 657445 (+) True G2339547
TU2678909 lncRNA downstream 8294 693842 ~ 694184 (+) True G2339801
TU2678928 lncRNA downstream 18388 703936 ~ 704424 (+) True G2339815
TU2678929 lncRNA downstream 20120 705668 ~ 706110 (+) True G2339816
TU2678930 lncRNA downstream 20650 706198 ~ 706486 (+) True G2339817
TU2678936 lncRNA downstream 23575 709123 ~ 710846 (+) True G2339823
XR_005041782.1 mRNA upstream 87007 595503 ~ 596337 (+) True LOC118947129
XM_036972373.1 mRNA upstream 378103 107069 ~ 305241 (+) False LOC118947131
XM_036972394.1 mRNA downstream 77031 762579 ~ 768787 (+) True LOC110495334
XM_036972370.1 mRNA downstream 125939 811487 ~ 817121 (+) False si:ch73-41e3.7
XM_036972372.1 mRNA downstream 125939 811487 ~ 817841 (+) False si:ch73-41e3.7
XR_005041785.1 mRNA downstream 125939 811487 ~ 817841 (+) False si:ch73-41e3.7
XM_036972371.1 mRNA downstream 126991 812539 ~ 817121 (+) True si:ch73-41e3.7
TU2678479 other upstream 218877 463198 ~ 464467 (+) True G2339478
TU2678285 other upstream 585488 97115 ~ 97856 (+) True G2339343
TU2679051 other downstream 185559 871107 ~ 873839 (+) False G2339912
TU2679060 other downstream 185559 871107 ~ 873839 (+) False G2339912
TU2679067 other downstream 185559 871107 ~ 873839 (+) False G2339912
TU2679071 other downstream 185559 871107 ~ 873839 (+) False G2339912
TU2679153 other downstream 286931 972479 ~ 972783 (+) True G2339955

Expression Profile