RNA id: TCONS_00060628


Basic Information

Item Value
RNA id TCONS_00060628
length 117
RNA type rRNA
GC content 0.54
exon number 1
gene id XLOC_031218
representative True

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 34237907 ~ 34238023 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCTGCttgccatgtcaccctgcagccctaGACCGGTtattcactgaagctaagcagggctgagcctgtttagtacctggatgggagaccactagggaacactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000175710

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00060610 lncRNA downstream 950323 33284809 ~ 33287584 (-) False XLOC_031208
TCONS_00060607 lncRNA downstream 950334 33284503 ~ 33287573 (-) False XLOC_031208
TCONS_00060609 lncRNA downstream 950346 33284721 ~ 33287561 (-) False XLOC_031208
TCONS_00060599 lncRNA downstream 963492 33269436 ~ 33274415 (-) False XLOC_031207
TCONS_00062041 lncRNA downstream 1309988 32922656 ~ 32927919 (-) True XLOC_031200
TCONS_00062042 lncRNA upstream 964543 35202566 ~ 35206296 (-) True XLOC_031225
TCONS_00060651 lncRNA upstream 1285386 35523409 ~ 35540980 (-) False XLOC_031229
TCONS_00060652 lncRNA upstream 1288734 35526757 ~ 35540895 (-) True XLOC_031229
TCONS_00060655 lncRNA upstream 1487524 35725547 ~ 35728227 (-) True XLOC_031230
TCONS_00062043 lncRNA upstream 2583851 36821874 ~ 36829073 (-) True XLOC_031238
TCONS_00060626 mRNA downstream 52410 34066591 ~ 34185497 (-) False XLOC_031217
TCONS_00060625 mRNA downstream 52792 34066591 ~ 34185115 (-) False XLOC_031217
TCONS_00060624 mRNA downstream 278039 33940215 ~ 33959868 (-) True XLOC_031216
TCONS_00060623 mRNA downstream 302511 33879807 ~ 33935396 (-) True XLOC_031215
TCONS_00060620 mRNA downstream 351412 33680145 ~ 33886495 (-) False XLOC_031214
TCONS_00060629 mRNA upstream 362691 34600714 ~ 34616599 (-) False XLOC_031219
TCONS_00060630 mRNA upstream 362907 34600930 ~ 34609337 (-) False XLOC_031219
TCONS_00060632 mRNA upstream 367774 34605797 ~ 34616599 (-) True XLOC_031219
TCONS_00060633 mRNA upstream 589591 34827614 ~ 34875858 (-) False XLOC_031220
TCONS_00060634 mRNA upstream 591474 34829497 ~ 34964830 (-) False XLOC_031220
TCONS_00060627 other downstream 87785 34142593 ~ 34150122 (-) True XLOC_031217
TCONS_00060622 other downstream 372707 33796998 ~ 33865200 (-) True XLOC_031214
TCONS_00060621 other downstream 412436 33784860 ~ 33825471 (-) False XLOC_031214
TCONS_00060613 other downstream 951249 33286587 ~ 33286658 (-) True XLOC_031210
TCONS_00060612 other downstream 952310 33285526 ~ 33285597 (-) True XLOC_031209
TCONS_00060631 other upstream 365791 34603814 ~ 34615966 (-) False XLOC_031219
TCONS_00060636 other upstream 595955 34833978 ~ 34834093 (-) True XLOC_031221
TCONS_00060637 other upstream 680968 34918991 ~ 34964787 (-) True XLOC_031220
TCONS_00060656 other upstream 1585395 35823418 ~ 35823548 (-) True XLOC_031231
TCONS_00060682 other upstream 3029224 37267247 ~ 37268199 (-) True XLOC_031247