RNA id: TCONS_00060736


Basic Information

Item Value
RNA id TCONS_00060736
length 841
RNA type processed_transcript
GC content 0.53
exon number 2
gene id XLOC_031280
representative True

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 38697496 ~ 38705831 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ctcagctctagcCCCCGCAGGGGCGACTAAAACGAGCTTCAACTCCCGCCGGAGTTCGGGCCCTGGCCACCTCCCACCCTCTCATGCAAGAGTCTCCACCGCCCAAATCTTCCCGACTCTTGCTTGAGCAAACTAACCCCAGCTCCCACCCCCGCAGGGGTGTATATATTTGAGCCTTGACTCCCGCGGAGTCAATCCAGCCCTGCCCTCACCCCGCCTAGGCTtgagCAGCCTACTTTGCTCTGCTCCCTTAGAAGCTTCTCTTCCTAAGCTATCAacgctatatccagcagccggatatggcttgTTACACCTGCCTTTTTGGGGGGctcttcaatacgcggctgctgtcccgagctattcaaaggcatttttggggagttctcgagatctacctgagctcaaactcccctcccgctttgcaacgggagggagtcctgggctcgaggatctcatgagctcagggctctctcccgggacagcatgccaaacaagcttataattaatcatcagctaagtgtgaactcttgaagtgaagtttatgtataaacaaatttcgagaggatcacgtgcttatgattgctagcagctgacccgcattatccaattcactactatccaatcagatgactcctaaactactataaataccctggggtttattccattgctatcttcgttttgaagagtccccccttcctcccctacgcctccttcttagacgggtgacacggtggcccagtgcctagcactgtcgcctcacagcaagaatgtctctggttcctggctctaccaaaactagcagacatttctgtgcggagttttgcacttctccccgtgc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000140466

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00062051 lncRNA downstream 63777 38614868 ~ 38633719 (-) True XLOC_031276
TCONS_00062052 lncRNA downstream 74525 38620957 ~ 38622971 (-) True XLOC_031277
TCONS_00060719 lncRNA downstream 441752 38250044 ~ 38255744 (-) True XLOC_031269
TCONS_00062050 lncRNA downstream 441796 38250044 ~ 38255700 (-) False XLOC_031269
TCONS_00061542 lncRNA downstream 590697 38105452 ~ 38106799 (-) True XLOC_031262
TCONS_00062053 lncRNA upstream 66516 38772347 ~ 38773486 (-) False XLOC_031282
TCONS_00060739 lncRNA upstream 66516 38772347 ~ 38777792 (-) True XLOC_031282
TCONS_00062054 lncRNA upstream 84901 38790732 ~ 38791845 (-) True XLOC_031284
TCONS_00062055 lncRNA upstream 336223 39042054 ~ 39045354 (-) True XLOC_031288
TCONS_00062056 lncRNA upstream 1174827 39880658 ~ 39881073 (-) True XLOC_031294
TCONS_00060733 mRNA downstream 52143 38641951 ~ 38645353 (-) False XLOC_031278
TCONS_00060734 mRNA downstream 52204 38644385 ~ 38645292 (-) True XLOC_031278
TCONS_00060732 mRNA downstream 54308 38641933 ~ 38643188 (-) False XLOC_031278
TCONS_00060731 mRNA downstream 86089 38604877 ~ 38611407 (-) True XLOC_031275
TCONS_00060730 mRNA downstream 163635 38517486 ~ 38533861 (-) True XLOC_031274
TCONS_00060737 mRNA upstream 27030 38732861 ~ 38762414 (-) True XLOC_031281
TCONS_00060738 mRNA upstream 65948 38771779 ~ 38777852 (-) False XLOC_031282
TCONS_00060740 mRNA upstream 80650 38786481 ~ 38824466 (-) False XLOC_031283
TCONS_00060741 mRNA upstream 81425 38787256 ~ 38820046 (-) False XLOC_031283
TCONS_00060746 mRNA upstream 448786 39154617 ~ 39171302 (-) True XLOC_031289
TCONS_00060729 other downstream 190848 38490346 ~ 38506648 (-) True XLOC_031273
TCONS_00060704 other downstream 659279 38035337 ~ 38038217 (-) True XLOC_031259
TCONS_00060699 other downstream 733733 37948854 ~ 37963763 (-) False XLOC_031257
TCONS_00060700 other downstream 737517 37953336 ~ 37959979 (-) True XLOC_031257
TCONS_00060692 other downstream 802605 37890607 ~ 37894891 (-) False XLOC_031255
TCONS_00060742 other upstream 92373 38798204 ~ 38798318 (-) True XLOC_031285
TCONS_00060743 other upstream 108333 38814164 ~ 38824346 (-) True XLOC_031283
TCONS_00060744 other upstream 186791 38892622 ~ 38892759 (-) True XLOC_031286
TCONS_00060745 other upstream 323980 39029811 ~ 39029925 (-) True XLOC_031287
TCONS_00060747 other upstream 618937 39324768 ~ 39324884 (-) True XLOC_031290

Expression Profile

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