RNA id: TCONS_00062543



Basic Information


Item Value
RNA id TCONS_00062543
length 750
RNA type mRNA
GC content 0.57
exon number 6
gene id XLOC_031957
representative True

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 17181157 ~ 17182473 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


aggttggaggagattgtccatgtcccacatgggtgaagaaagaggagaagatacacgggactgcaccactgagcttcctggttttttggctcctctgccttcacatttggctaattctgcatccacagaccagaggaacagcaagaggaaaaggcagagcagcagccagcaaacactgtccacctcgtccagcagaccagccaaacgctctcgcagagacttgtacctgaagggcccgttgctgggacgaggtggattcggctctgtgtttgctgggatgcgcaggtctgatggactgccagtggccatcaagtacgtgtcgaaggaccggacccccgagcgactgaaagttgatggtcagggtcggctgccgctggaggtggcattgatgacccgtgtcacgtcagctcctgcctgccccagtgtcctgcagctgctggactggtttgaccgtcccagacgctacatcctgatcctggagcgaccggatccttgccaagatctccagagcttctgtgaggagaacggctgtctggatgagcgtctggccaagaaagtgctggtgcagctgatcgaggccctaaaacactgcgagagccgcggcgtcctgcaccgggacgtcaaaccagaaaacctgctgatctccacagagtcccaggacatcaagctgctggacttcggctgtggagatctgctgaagcgatcggcctacaaatactttgcaggcactcctgcatacgctcctcctga

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000154962

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00064827 lncRNA upstream 371931 16799202 ~ 16809226 (+) False XLOC_031948
TCONS_00064825 lncRNA upstream 506473 16591985 ~ 16674684 (+) True XLOC_031945
TCONS_00064826 lncRNA upstream 512011 16667458 ~ 16669146 (+) True XLOC_031946
TCONS_00062529 lncRNA upstream 783632 16394629 ~ 16397525 (+) True XLOC_031941
TCONS_00062527 lncRNA upstream 1187193 15993146 ~ 15993964 (+) True XLOC_031939
TCONS_00064612 lncRNA downstream 349545 17532018 ~ 17533025 (+) True XLOC_031963
TCONS_00062549 lncRNA downstream 429571 17612044 ~ 17613202 (+) True XLOC_031964
TCONS_00064613 lncRNA downstream 524536 17707009 ~ 17707782 (+) True XLOC_031965
TCONS_00062553 lncRNA downstream 986486 18168959 ~ 18177200 (+) True XLOC_031967
TCONS_00062556 lncRNA downstream 1091124 18273597 ~ 18274390 (+) True XLOC_031968
TCONS_00062542 mRNA upstream 66164 17113677 ~ 17114993 (+) True XLOC_031956
TCONS_00062541 mRNA upstream 126191 17053650 ~ 17054966 (+) True XLOC_031954
TCONS_00062539 mRNA upstream 197233 16982613 ~ 16983924 (+) True XLOC_031952
TCONS_00062538 mRNA upstream 229997 16949735 ~ 16951160 (+) True XLOC_031951
TCONS_00062537 mRNA upstream 284163 16895685 ~ 16896994 (+) True XLOC_031950
TCONS_00062545 mRNA downstream 25549 17208022 ~ 17209265 (+) True XLOC_031959
TCONS_00062546 mRNA downstream 85208 17267681 ~ 17268997 (+) True XLOC_031960
TCONS_00062550 mRNA downstream 607008 17789481 ~ 17790513 (+) True XLOC_031966
TCONS_00062551 mRNA downstream 960150 18142623 ~ 18177170 (+) False XLOC_031967
TCONS_00062552 mRNA downstream 960244 18142717 ~ 18181589 (+) False XLOC_031967
TCONS_00062540 other upstream 130022 17051039 ~ 17051135 (+) True XLOC_031953
TCONS_00062521 other upstream 1636987 15544055 ~ 15544170 (+) True XLOC_031935
TCONS_00062509 other upstream 3200065 13980945 ~ 13981092 (+) True XLOC_031925
TCONS_00062481 other upstream 4135656 13039990 ~ 13045501 (+) True XLOC_031909
TCONS_00062453 other upstream 5406425 11774617 ~ 11774732 (+) True XLOC_031897
TCONS_00062544 other downstream 22719 17205192 ~ 17205289 (+) True XLOC_031958
TCONS_00062547 other downstream 135084 17317557 ~ 17317653 (+) True XLOC_031961
TCONS_00062548 other downstream 199012 17381485 ~ 17381582 (+) True XLOC_031962
TCONS_00062555 other downstream 1071927 18254400 ~ 18261416 (+) True XLOC_031969
TCONS_00062570 other downstream 1360168 18542641 ~ 18543403 (+) True XLOC_031975

Expression Profile


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