RNA id: TU106631


Basic Information

Item Value
RNA id TU106631
length 331
RNA type TUCP
GC content 0.54
exon number 2
gene id G79615
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 38691646 ~ 38711009 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ccctatggtcccacagccctatgtccccacagccctatggtcccacagctctatggtcccacagccctatgttcccacagccctatggtcccacaggttcccacagccctatggtcccacagccctatgttcccacagccctatgttcccacagccctatggtcccacagccctatggtcccacagccctatgttcccacagccctatgttcccacagccctatggtcccacagccctatgttcccacagccctatgttcccacagttcccacatttctaagatttttttccaaaattaggccctatgttcccacatttcctttttcatga

Function

GO: NA

KEGG:

id description
ko04151 PI3K-Akt signaling pathway
ko04512 ECM-receptor interaction
ko04510 Focal adhesion
ko04974 Protein digestion and absorption
ko05165 Human papillomavirus infection

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU106620 lncRNA upstream 14144 38676736 ~ 38677502 (+) False cpne4a
TU106615 lncRNA upstream 18634 38666272 ~ 38673012 (+) True G79605
TU106614 lncRNA upstream 18634 38672011 ~ 38673012 (+) False G79605
TU106618 lncRNA upstream 18634 38672415 ~ 38673012 (+) False G79605
TU106607 lncRNA upstream 43732 38642548 ~ 38647914 (+) True LOC120563036
TU106633 lncRNA downstream 5379 38716388 ~ 38800638 (+) True G79617
TU106639 lncRNA downstream 85609 38796618 ~ 38797157 (+) True G79623
TU106642 lncRNA downstream 93564 38804573 ~ 38806484 (+) True G79625
TU106645 lncRNA downstream 141585 38852594 ~ 38853108 (+) True G79628
TU106652 lncRNA downstream 163918 38874927 ~ 38878002 (+) True G79635
XM_039807024.1 mRNA upstream 99151 38581518 ~ 38592495 (+) True LOC120563014
XM_039807025.1 mRNA upstream 100750 38581518 ~ 38590896 (+) False LOC120563014
XM_039806199.1 mRNA upstream 116078 38525204 ~ 38575568 (+) True tg
XM_039806195.1 mRNA upstream 236087 38433974 ~ 38455559 (+) True cmtm6
XM_039807031.1 mRNA upstream 263161 38403152 ~ 38428485 (+) True si:dkey-7j14.6
XM_039807018.1 mRNA downstream 173281 38884290 ~ 38903260 (+) True plin6
XM_039807032.1 mRNA downstream 284144 38995153 ~ 39009576 (+) True LOC120563021
XM_039807033.1 mRNA downstream 284145 38995154 ~ 39009576 (+) False LOC120563021
XM_039807034.1 mRNA downstream 284162 38995171 ~ 39009576 (+) False LOC120563021
XM_039807035.1 mRNA downstream 309801 39020810 ~ 39030834 (+) False LOC120563022
TU106613 other upstream 24122 38666272 ~ 38667524 (+) False G79605
TU106301 other upstream 246976 38433993 ~ 38444670 (+) False cmtm6
TU106244 other upstream 371039 38170054 ~ 38320607 (+) True G79351
TU106246 other upstream 371217 38170054 ~ 38320429 (+) False G79351
TU106280 other upstream 387958 38301425 ~ 38303688 (+) False LOC120562481
TU106594 other downstream 591030 39302039 ~ 39304070 (+) True dcst2
TU106586 other downstream 602980 39313989 ~ 39321325 (+) False LOC120563015
TU106757 other downstream 722452 39433461 ~ 39454292 (+) True G79713
TU106759 other downstream 722452 39433461 ~ 39454292 (+) False G79713
TU106769 other downstream 749439 39460448 ~ 39463841 (+) True G79722

Expression Profile