Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU157988 |
| length | 1230 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G117220 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 23468620 ~ 23519769 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU157984 | lncRNA | upstream | 6320 | 23446351 ~ 23462300 (+) | True | G117219 |
| TU157982 | lncRNA | upstream | 27785 | 23439571 ~ 23440835 (+) | False | kdsr |
| TU157950 | lncRNA | upstream | 90104 | 23377133 ~ 23378516 (+) | True | G117190 |
| TU157944 | lncRNA | upstream | 94421 | 23373710 ~ 23374199 (+) | True | G117187 |
| TU157860 | lncRNA | upstream | 550514 | 22917876 ~ 22918106 (+) | True | G117128 |
| TU158087 | lncRNA | downstream | 222715 | 23742484 ~ 23745977 (+) | True | G117297 |
| TU158126 | lncRNA | downstream | 328918 | 23848687 ~ 23848946 (+) | True | G117315 |
| TU158131 | lncRNA | downstream | 336360 | 23856129 ~ 23856531 (+) | True | G117320 |
| TU158159 | lncRNA | downstream | 377474 | 23897243 ~ 23897646 (+) | True | G117344 |
| TU158161 | lncRNA | downstream | 378881 | 23898650 ~ 23898912 (+) | True | G117346 |
| XM_039815258.1 | mRNA | upstream | 809 | 23441591 ~ 23467811 (+) | True | bcl2b |
| XM_039815252.1 | mRNA | upstream | 27777 | 23433625 ~ 23440843 (+) | True | kdsr |
| XM_039816495.1 | mRNA | upstream | 35246 | 23422716 ~ 23433374 (+) | True | vps4b |
| XM_039816496.1 | mRNA | upstream | 35246 | 23425370 ~ 23433374 (+) | False | vps4b |
| XM_039817029.1 | mRNA | upstream | 124725 | 23325303 ~ 23343895 (+) | False | LOC120569134 |
| XM_039815089.1 | mRNA | downstream | 72963 | 23592732 ~ 23681748 (+) | False | LOC120567964 |
| XM_039815088.1 | mRNA | downstream | 73262 | 23593031 ~ 23681748 (+) | False | LOC120567964 |
| XM_039815092.1 | mRNA | downstream | 73371 | 23593140 ~ 23681748 (+) | False | LOC120567964 |
| XM_039815090.1 | mRNA | downstream | 83630 | 23603399 ~ 23681748 (+) | False | LOC120567964 |
| XM_039815091.1 | mRNA | downstream | 90965 | 23610734 ~ 23681748 (+) | False | LOC120567964 |
| XR_005640697.1 | other | upstream | 789889 | 22641510 ~ 22678731 (+) | False | LOC120568311 |
| TU157733 | other | upstream | 856211 | 22608064 ~ 22612409 (+) | False | LOC120567968 |
| XR_005640709.1 | other | upstream | 1571229 | 21870953 ~ 21897391 (+) | False | LOC120568354 |
| TU157037 | other | upstream | 2553332 | 20882706 ~ 20915288 (+) | False | LOC120568904 |
| XR_005640618.1 | other | upstream | 3092987 | 20373235 ~ 20375633 (+) | True | LOC120567833 |
| TU158062 | other | downstream | 157310 | 23677079 ~ 23685804 (+) | True | LOC120567964 |
| TU158130 | other | downstream | 331110 | 23850879 ~ 23855157 (+) | True | G117319 |
| unassigned_transcript_561 | other | downstream | 348485 | 23868254 ~ 23868325 (+) | True | trnaw-cca_13 |
| TU158168 | other | downstream | 386101 | 23905870 ~ 23908401 (+) | True | G117353 |
| TU158169 | other | downstream | 392895 | 23912664 ~ 23914498 (+) | True | hes6 |
