RNA id: XM_039815258.1


Basic Information

Item Value
RNA id XM_039815258.1
length 5603
RNA type mRNA
GC content 0.44
exon number 2
gene id bcl2b
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 23441591 ~ 23467811 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCCTACTGAAGAGGATATTAGGAGCAATCGTGGAAGAGGGCTCAGTCCGACCTTGTCTGGCTCACAGTCCCGCGCGTGGTTGTGCGTAAACGCTGCTAAAATAGTTGGCGGCGTTTAAAGCCCCTTCAGGCGCGTACAACTTTGGCCctcattcatgttttttttcgcAACACATTCACGTCTGGGTGTTGTGCACAGGACAACCTCTTCCGCATATTGGATTTCAATGCAAAGAGAAGGTCGCCAACGTCCATCTAAGGATTCGGGAAATGAAGACAGCTACTGACACGGACTCAgtattatttttacttttgaaaCGTTTGAAACGCAGTTTTGATTAAGGGATTTTCTTCAACTCGCGAAGCATTTGCTCCCTGTGTGGGATTACTCGTTGCATTGCTCTTATTTGAATGTAATTGAGTTTTGGATACGCCTGTGCTGTGCATTGTACAGTGCACAAATTCGATCACGATGTATTTAATTTAGGACAACCTCTTTCTATACAAAGTGCCAAATTAAGCCGGAATGGCGAACGAGTGTAATCGCAACATTGTGGAAAAGTATATCTGCCATAAACTCTCCAAACGGGGCTACGTGTTTGGGTTTGATGATGTCCGGGATGAAGATGCTGCTAATAATGGGTCAATAGTTGTCCCTCCACCGACTTTGGTTCGCCGGTGCCGTGAAGCCAGCACTGGGCCTGACAGCGAGAGCATCCCTCACCTCTGCAAACGGCTCCCCCAGTCTGACCCGACCGCCGCCATCCACAGAGTTCTCCGCGAGGCTGGAGACGAACTTGAGAGACTATACCAGCCGGACTTCACGGAGATGTCGCGGCAGCTGTATCTCACCTCCACCACGGCGCAACGGAGATTCGCCGAGGTGATCGACGAACTGTTCCGGGACGGGGTGAACTGGGGCCGGATAATCGCTTTCTTCGAGTTCGGGGGCACGGTGTGCGTGGAGTGCGCCGCCAAAGAGGAGATGACATCGCAGGTGGACAACATCGCCGAGTGGATGACGGAGTATCTAAATGGACCTCTAAACAGCTGGATACAAGATAACGGAGGATGGGCTGCCTTTGTGGAGCTGTATGACAGACAGAGGGACTCCCTCTTCAGCTGCTCCTGGCCCTCCATTAAGACGGTCTTTGGTCTAGCTGCACTCGGGGCAGCTAGCCTCACCTTCGGAGCATACCTGACACAGAAGTGAAAGAGCCCTCGTTCTACCAGCTTGACTTTattccttctcctccttcttctccttgTGCCTCTTCTTATTCCTTTTTATAGACGCCCCTGACCCCTCAGAGACAACCTTCAGACTCTTTTGAATCTGGCTCTCTTCAAAGCCCTCTCTCAGAAATCTCCCTCTTCCTCGCCCCTACATGTCAAAACAGACACAAATCAAAACAACTGAAGCAACCAGATGCACAGCCTATACAGAGCAAAGGATGTCTTGAAAAGAGGCAACTTAGATGTAATCACACTAATCTGCTGAGTAGCCTACAACTGAGAAATGAGGTGGCATCAGTGgcatgcattttttatttttttttgttctgcctGCTTCTGTACTAGTTATAGCATGAATGTTGAGTGTTTGTGTAGATGTTGTTGCATGTGTCAGAGCTCATGCAGGATCTCTCTTTGGAGGCCTTGGTGATGGGGGTGCAGGGACAACGATGCTCCAAACCGGAGAGGAAGCGGCCGCAGCCCTGCCCCTGCTTGTTAGGGTGAAGAACCCCGTTTTGAACTgtgttgccccccccccccctgcagcCGTCCTTCAAAGGACTTCCTCCACAGAACAGCTGCTCAGAATGTATAATGGAAACGGCACGGTTTGTGTCTACTGCTTTCACTCCTTAGACAGCTCCAGTGAACTTTGAACACACTGCACCATTATACTCTCCATGGTCCTTAATATGTAGAGGAAGGGCCAGCGGAAGACTGAGGTCTGCTGATATTTCTTTTGCAGAGTTCGAAAGCTCCTCGATTGAGATTTTGATGTTGGTTTTAATTTTTGCAGCATGCCAAACCCCAAATTGTGTGGTTTtaccacagaaaaaaaagaggagaatgGAGAATTTTTTGAAGGACTGAAAAGCATGCAGAAGAAGTCTGTTGTTGCATAAAACTCATATGATGATGAATATACTGAGAAAAATGTCACGCGCAGCACAAAACAGTAAGGTAGAAGCATCTTAAAAAGGAAGCATGAATGGACAGGATTTGAAATGTGCATTCCTCAAGCAAAGCGATGTGAACGAGACCACCCATCTGCTAAAATGACTCTACTTTAAAAGCACCATCACTGTTCACTGATTAGCACCAAGCAACccttaaaaacagttttgttttctattttctaCCACTGTTTCTACCAGCTTTCTTACTCTTAACTCAGTCCATTCGTTGTCAGATTGTTTGGGCTCACCCAGGTCTCAGAGCTGACCCTGTCAACATGTGTCCTCCAGCTGCTGAGGCCCCACAGTGACCTGGTACTTCTAGAATCCACTCTGACAAAGACGCTTGTTGATGTGGACTGAGAAAATCTCGCTTGGCCACAGATGACTGAGTGGAATACCACGGCAGCAGGGTTTCAGTTTAGGACTAAAGCCAGTGGGTCCCGTGTGCTGGAACCTGAGATGTCCCCTCTCTCCGGTCTGCAAATGCGTTCAGTCATTGATTTGTTTTATTGATGTTTGTCTTGTGTTACAGTCTGACAGAAAATTTGGAAATGCTCACAGGCTTCAAAAGATTTTGTTGTAGCCTGCACAACTTTACTTGGTTAtggaaaagtgatttttttttgtcattacaaATCTTCAACTTCTTTATTGCATGGATGAAAGATACTGTCTTCACACGAGAAATATGTGTAACCATATTTATAACAGAATAGGGTAGAAGATAACGAATAACAGCAAAGGAGTTGCATTTTTCTATTTATTGAGAGGTACCAgatcacagattttttttaacagtagctactttgatgaaaaataaattgttttcaccttttttCTGTTCTATTGAATCACACTGTAACTACATTTTTTTCCTGGCTGCTATTATAATGAGaaagatgttttaaaaaaaaaaaaaagtgaatttctGTGTTGTATTACTATTGGCTTAAGGCTGCTATACTGTcgatttaacttttaattaacAGCttaaactgccacagatttacAGTATAGTTCTTGAGAGCTGGAAACCAAAGTTAACTTGTATTaatctttaatttaaaaaaacaaacaaaaaaagtagcTTAAGGAGGATACACGTTGCTTCACTTCACTGAGTCTATTCAGTGAGGTTTTATGATCTCTCTGGGTTTGTCTAGTGTTACTGTACTATATCAGCTTAACTTTTGTCAGCTTTGTGCTCCAATGATGACTCAGTGCTTATCTGTAAAATGTTGACCTGCCAGAGTTAAACCTTGTCTCAGTTGTCCCACTCTCATTACAGCAACTCACAGTCGTGTGATATTCCTAGtgatgtgtgtgtaagagagaatCAGAAGGCTATTTATGAGCAGGAGTAGGAACAGTTCAACCGcaatatactgtaattttatATTCTCTGTGCATAATATATGAATGTAGACGCCATGGTTGCTACTGTTTCATGTCTATAATCACAAACCTGTAGCACTTAAAAAAGTgaattgtgtttctgttgtttacTGCTATATCCACAATAAGCTAGTGGGATCATATTGTTCCTAATAAACCAGATTTCTCAAGCAGCTGCAGTCCAAGTTCACGTTGcgtctgctttaaaaaaaaatgtttttatcgaTTCTCAGCTTTGTCTCCGTGCATATCCgcaagacagaaagaaaataagagAAATTGTCAGTGAAGAGCAGTGTATCAACAGTGCTGTTTTGATGATCTGTGATCTATTCACAGCTGTGAATTGTATATGTAATCTTGGTTGTGTCAACGTGAGCGTCCTTGTGAAGGACTGTGaaagcacagcagcagcaccccATCAGACATCAAAGCTGTCCCCAAACACTGCACTTGTCAGCCTCCCTCTTCTGCTCCATGTGCTGTTAAACATGAGTGCAAAAACCCAAAATGCCCTGaggctagttttttttttttttactgttctgATCACACTTGTCTTCAAAGGCCACGGCACTCTTGCTGCTCGGTGGAATTTGTGAAAAGCATGATGTAGTAAAACTAATGTTGAAAGAGTTGAGTGGGTATGGTAAAATGAAGGGAGTGAAAgaaagtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcacacataCATCCCTGAGGAGACCAACAGGAAAGTTCATTTGGGCTGGAGCCCCACGCAAAACCTCCTCTCGCTCCCTCACTCGCCATGCATATAAAATGCAGGACACGCTCTGAAGAGGAATGTTAAATCAAGCCAGAGACTTTCAAAAGAGAGTCCAGTGTGAGTGTGgatggtgaatgtgtgtgtgtgtgtgtaaagaaagAGATGGGCAGTAAGAAgaggaaagggggaggggggggcggtGAGTGAAGCCCTCCTGCCTCTTCTGCTTTAGGGCTACACGGTGTAGAGGAGGCTTCCCCAGCACTGGATATCACAGGGGAGATTGGGAGATCAAAGCAGATTGTCTGGAGTAAGTCTGGTCCAGTTATACCCCTCATTTGGAAGTCCATCAGATCCACTCACGGCACCTTTGCCTCATTTAGAGGCAGCCTTTGCTGCATTAAAAACTTCCTTCTGAAATCTAGCAATTTCCTTAAAAAGAGATCAAAAAAAGCACCCCTCGCAAATCATTCATCTCTCATTGGAATGCAAATATTCAATGAGAAAGAGTTACTTATTACACCAACTGTAgaagcagattttttttaagccttgaAGTCCTGCCTGAAATGTGTGCTGCAGTGTCACCTTGTGGCTGCTTCACAAACAATCCAGCAGGGTTTAAAACATCAGGCAATCACAGTGCCAAGAGTCTGCACATTTCTACCTCATCTACAGGAAATGACAGCTGATTTCACTGAGCAGATCATCTTCAAATATGGAGAATGAACCATCAGCTGCTGCAGCATTCAGCTGAAATAAAAACCAGCCTTTTCTCAGCACTCTCTGGCACATGGTTGCCTATCCCTGCTCTAAAATATCCTCAGGGCACCATGCCATGAAGAGAAAAAGGCTCCAGGCGGAAGGCTCAACTGCTTACAGCTTCGGTGATGACTGTTCAAGCCGTCTGTGGTTAGTGATAGTCTTCTTAGAAATGTCTAATGAAAGAAAAGCATCTGAATCTCACAGAATATGGTAATCAGAAGGAAAGAAGACGTGGTGTAACTTCCAACTTCAAATCATGTCTGTGATAACCCATACAGACCATTTGTTCAAAGCTTTAAAAAGTAATGTTAAACTATTTGTTTGAATACTAAGTGATAGTACTGAAGGTTACTGTAGTGCTGCACATACCACAACACTGCTTTGTAATAATTTGTTTTGTGGTGTTGCTTTTTCAGGGTTTTTGCTGATATGAAAATTAGGAAACTATTGCAACACTGTTATTTACTGTCGTCCATCATTAAAGAACAGTTGTACGTGT

Function

GO: NA

KEGG:

id description
K02161 BCL2; apoptosis regulator Bcl-2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU157982 lncRNA upstream 756 23439571 ~ 23440835 (+) False kdsr
TU157950 lncRNA upstream 63075 23377133 ~ 23378516 (+) True G117190
TU157944 lncRNA upstream 67392 23373710 ~ 23374199 (+) True G117187
TU157860 lncRNA upstream 523485 22917876 ~ 22918106 (+) True G117128
TU157795 lncRNA upstream 687101 22752252 ~ 22754490 (+) True G117082
TU157987 lncRNA downstream 809 23468620 ~ 23514085 (+) True G117220
TU157988 lncRNA downstream 809 23468620 ~ 23519769 (+) False G117220
TU157990 lncRNA downstream 4736 23472547 ~ 23473684 (+) True G117221
TU157998 lncRNA downstream 25295 23493106 ~ 23566317 (+) True G117228
TU158087 lncRNA downstream 274673 23742484 ~ 23745977 (+) True G117297
XM_039815252.1 mRNA upstream 748 23433625 ~ 23440843 (+) True kdsr
XM_039816495.1 mRNA upstream 8217 23422716 ~ 23433374 (+) True vps4b
XM_039816496.1 mRNA upstream 8217 23425370 ~ 23433374 (+) False vps4b
XM_039817027.1 mRNA upstream 97696 23325302 ~ 23343895 (+) True LOC120569134
XM_039815089.1 mRNA downstream 124921 23592732 ~ 23681748 (+) False LOC120567964
XM_039815088.1 mRNA downstream 125220 23593031 ~ 23681748 (+) False LOC120567964
XM_039815092.1 mRNA downstream 125329 23593140 ~ 23681748 (+) False LOC120567964
XM_039815090.1 mRNA downstream 135588 23603399 ~ 23681748 (+) False LOC120567964
XM_039815091.1 mRNA downstream 142923 23610734 ~ 23681748 (+) False LOC120567964
XR_005640697.1 other upstream 762860 22641510 ~ 22678731 (+) False LOC120568311
TU157733 other upstream 829182 22608064 ~ 22612409 (+) False LOC120567968
XR_005640709.1 other upstream 1544200 21870953 ~ 21897391 (+) False LOC120568354
TU157037 other upstream 2526303 20882706 ~ 20915288 (+) False LOC120568904
XR_005640618.1 other upstream 3065958 20373235 ~ 20375633 (+) True LOC120567833
TU158062 other downstream 209268 23677079 ~ 23685804 (+) True LOC120567964
TU158130 other downstream 383068 23850879 ~ 23855157 (+) True G117319
unassigned_transcript_561 other downstream 400443 23868254 ~ 23868325 (+) True trnaw-cca_13
TU158168 other downstream 438059 23905870 ~ 23908401 (+) True G117353
TU158169 other downstream 444853 23912664 ~ 23914498 (+) True hes6

Expression Profile