Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005640690.1 |
| length | 436 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 4 |
| gene id | LOC120568242 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 35822425 ~ 35830257 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU162328 | lncRNA | upstream | 46202 | 35775960 ~ 35776223 (+) | True | G120575 |
| TU162320 | lncRNA | upstream | 62197 | 35759693 ~ 35760228 (+) | True | G120568 |
| TU162302 | lncRNA | upstream | 143459 | 35678592 ~ 35678966 (+) | True | G120552 |
| TU162299 | lncRNA | upstream | 157032 | 35665169 ~ 35665393 (+) | True | G120549 |
| XR_005640604.1 | lncRNA | upstream | 163180 | 35655949 ~ 35659245 (+) | True | LOC120567666 |
| TU162370 | lncRNA | downstream | 58389 | 35888646 ~ 35888885 (+) | True | G120611 |
| TU162372 | lncRNA | downstream | 59629 | 35889886 ~ 35890255 (+) | True | G120613 |
| TU162436 | lncRNA | downstream | 358076 | 36188333 ~ 36188558 (+) | True | G120675 |
| XR_005640756.1 | lncRNA | downstream | 374294 | 36204551 ~ 36206241 (+) | True | LOC120568724 |
| TU162439 | lncRNA | downstream | 391162 | 36221419 ~ 36221770 (+) | True | G120678 |
| XM_039816699.1 | mRNA | upstream | 180392 | 35594878 ~ 35642033 (+) | True | LOC120568940 |
| XM_039814677.1 | mRNA | upstream | 378612 | 35431679 ~ 35443813 (+) | True | LOC120567707 |
| XM_039814983.1 | mRNA | upstream | 559523 | 35261558 ~ 35262902 (+) | True | LOC120567912 |
| XM_039816995.1 | mRNA | upstream | 653709 | 35165658 ~ 35168716 (+) | False | LOC120569116 |
| XM_039816721.1 | mRNA | downstream | 618780 | 36449037 ~ 36463662 (+) | True | pold3 |
| XM_039816722.1 | mRNA | downstream | 618780 | 36449037 ~ 36463662 (+) | False | pold3 |
| XM_039814682.1 | mRNA | downstream | 735504 | 36565761 ~ 36583870 (+) | True | LOC120567713 |
| XM_039816061.1 | mRNA | downstream | 758397 | 36588654 ~ 36620596 (+) | True | LOC120568503 |
| XM_039816062.1 | mRNA | downstream | 793820 | 36624077 ~ 36710812 (+) | True | LOC120568504 |
| XR_005640811.1 | other | upstream | 213066 | 35603388 ~ 35609359 (+) | False | LOC120568940 |
| unassigned_transcript_569 | other | upstream | 1046276 | 34776078 ~ 34776149 (+) | True | trnam-cau_26 |
| unassigned_transcript_568 | other | upstream | 1050204 | 34772150 ~ 34772221 (+) | True | trnam-cau_25 |
| unassigned_transcript_567 | other | upstream | 1050279 | 34772074 ~ 34772146 (+) | True | trnar-ccu_3 |
| TU161934 | other | upstream | 1364814 | 34453722 ~ 34457611 (+) | True | G120249 |
| unassigned_transcript_570 | other | downstream | 397567 | 36227824 ~ 36227906 (+) | True | trnal-uaa_3 |
| unassigned_transcript_571 | other | downstream | 398198 | 36228455 ~ 36228537 (+) | True | trnal-uaa_4 |
| unassigned_transcript_572 | other | downstream | 398796 | 36229053 ~ 36229135 (+) | True | trnal-caa |
| unassigned_transcript_573 | other | downstream | 404826 | 36235083 ~ 36235153 (+) | True | trnal-uaa_5 |
| unassigned_transcript_574 | other | downstream | 407510 | 36237767 ~ 36237849 (+) | True | trnal-uaa_6 |
