RNA id: TU303475


Basic Information

Item Value
RNA id TU303475
length 455
lncRNA type inter_gene
GC content 0.53
exon number 4
gene id G224117
representative True

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 30918503 ~ 30920795 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTAGTATCAGCTAGTATCAGCTAGTATCAGCTAGTATCAGGTAGTATCAGGTAGTATCAGCTAGTATCAGGTAGTATCAGGTAGTATCAGCTAGTATCAGGTAGTATCAGGGAGTATCAGGTAGAGACGGAGAGCCTGTCCTCACCGGGCCGGTAAGGtttccttttcctcttcttGTTGTCGTCGGTAACCTCAGGCTCCTTGGTGAGGTCATCGTCGTGGGCGTGGTCTCGCTCGGGGCTGGAGTCGGATTTCATCTCACACTCTACGTCAcctctgctgGGGTCCTGCTCTGTAGGGGGGTCAGTGTCCGGTGGGGTCTGCAGCACAGAGACGCTGTTCTGGTTGATGATCCTCAGCTTTAATTTGGGTTTACACCTGCGGTACCTGCGCGGTGATGTCAGAGGCTCAACCAGAGACTGGAGGTGAGAGAGACCTGACTCTGTCAGACTCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU303420 lncRNA downstream 34455 30861516 ~ 30884048 (-) True G224072
TU303452 lncRNA downstream 59486 30858492 ~ 30859017 (-) True G224101
XR_005638059.1 lncRNA downstream 76017 30840829 ~ 30842486 (-) True LOC120552652
XR_005638058.1 lncRNA downstream 77948 30836374 ~ 30840555 (-) True LOC120552651
TU303416 lncRNA downstream 93647 30815930 ~ 30824856 (-) False G224069
TU303476 lncRNA upstream 894 30920803 ~ 30922810 (-) True G224118
TU303479 lncRNA upstream 894 30920803 ~ 30922810 (-) False G224118
TU303489 lncRNA upstream 17151 30937060 ~ 30937312 (-) True G224126
TU303497 lncRNA upstream 42372 30962281 ~ 30963442 (-) True G224133
TU303501 lncRNA upstream 46281 30966190 ~ 31086609 (-) False G224135
XM_039789911.1 mRNA downstream 112167 30797184 ~ 30806336 (-) True LOC120552139
XM_039790971.1 mRNA downstream 319571 30579491 ~ 30598932 (-) True LOC120552744
XM_039790793.1 mRNA downstream 425124 30446866 ~ 30493379 (-) True LOC120552614
XM_039790834.1 mRNA upstream 97921 31017830 ~ 31020186 (-) False LOC120552646
XM_039790832.1 mRNA upstream 97921 31017830 ~ 31020186 (-) False LOC120552646
XM_039790831.1 mRNA upstream 97921 31017830 ~ 31020186 (-) True LOC120552646
XM_039790830.1 mRNA upstream 97921 31017830 ~ 31020186 (-) False LOC120552646
XM_039790836.1 mRNA upstream 98583 31018492 ~ 31020186 (-) False LOC120552646
TU303394 other downstream 236921 30632746 ~ 30681582 (-) True G224051
XR_005638046.1 other downstream 425124 30475318 ~ 30493379 (-) False LOC120552614
TU303357 other downstream 452634 30461502 ~ 30465869 (-) False G224031
XR_005638047.1 other downstream 497956 30406956 ~ 30420547 (-) False LOC120552615
XR_005638048.1 other downstream 1061531 29851546 ~ 29856972 (-) False LOC120552628
TU303612 other upstream 290852 31210761 ~ 31211360 (-) True G224195
TU303705 other upstream 380114 31300023 ~ 31301032 (-) True G224245
TU303660 other upstream 414897 31334806 ~ 31337397 (-) False LOC120551970
TU303782 other upstream 696161 31616070 ~ 31665371 (-) True G224289
TU303776 other upstream 705387 31625296 ~ 31660992 (-) False G224289

Expression Profile