RNA id: TCONS_00073307


Basic Information

Item Value
RNA id TCONS_00073307
length 513
RNA type processed_transcript
GC content 0.49
exon number 4
gene id XLOC_037247
representative True

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 32178050 ~ 32188445 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTGAAGACTACCTGCTATTCGTGCCCTGGTAAAACTACACCTCTCTCGTTTCTACAGTTCGCCCTCATTTGGTCAAGGCGTCTTGCTCTGATGGAAAACTCTTCAATCACCTGGAGACAGTGTGGCGCTTCAGTCCTGGCCTTCCTGGCTACCCACGTACATGCACACTCGACTTCGCTATTTCCTTTGAGTTCCGCTCACTCCTGCATTCTCAGTTGGCCACCGTTTTCTTCGATGAGGTCGTGAAGCAAATGGTATCTGCCTTCGAGCGACGGGCATCCAAGCTGTACGGCCCAGAGACGCAGATCCCACGTGAACTGATGTTCCATGAGATCCACCACACGTAGTTCATTCCACAGCTTCAGATGGAAGAGAAGAGGGGGTGTTTAGGGAACGGGAGGGTTATTGAAAACATACATATAGAGTATTATAAGGACAATCAGGAGAGCGGGAGCTGTGTGCCTGAATATCGTCAGTGCCTGGTCCAAATAAAACCGTTTCACTttttttatg

Function

GO:

id name namespace
GO:0006744 ubiquinone biosynthetic process biological_process
GO:0045333 cellular respiration biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016020 membrane cellular_component
GO:0005739 mitochondrion cellular_component
GO:0048039 ubiquinone binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050417-263 Predicted to enable ubiquinone binding activity. Predicted to be involved in cellular respiration and ubiquinone biosynthetic process. Predicted to be located in mitochondrial inner membrane. Predicted to be active in mitochondrion. Orthologous to human COQ10B (coenzyme Q10B).

Ensembl:

ensembl_id ENSDART00000131596

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00073295 lncRNA upstream 112922 32069957 ~ 32071133 (+) False XLOC_037245
TCONS_00075154 lncRNA upstream 269593 31913496 ~ 31914462 (+) True XLOC_037243
TCONS_00073286 lncRNA upstream 755321 31347037 ~ 31428734 (+) False XLOC_037238
TCONS_00073308 lncRNA downstream 1887 32189139 ~ 32192519 (+) True XLOC_037248
TCONS_00074917 lncRNA downstream 36443 32223695 ~ 32238109 (+) True XLOC_037249
TCONS_00075155 lncRNA downstream 157631 32344883 ~ 32349025 (+) True XLOC_037252
TCONS_00074918 lncRNA downstream 349494 32536746 ~ 32537384 (+) True XLOC_037254
TCONS_00073321 lncRNA downstream 461824 32649076 ~ 32651437 (+) False XLOC_037255
TCONS_00073299 mRNA upstream 78021 32073606 ~ 32106034 (+) False XLOC_037246
TCONS_00073298 mRNA upstream 78021 32073606 ~ 32106034 (+) False XLOC_037246
TCONS_00073297 mRNA upstream 78021 32073606 ~ 32106034 (+) False XLOC_037246
TCONS_00073300 mRNA upstream 79642 32073723 ~ 32104413 (+) False XLOC_037246
TCONS_00073301 mRNA upstream 80204 32076658 ~ 32103851 (+) False XLOC_037246
TCONS_00073309 mRNA downstream 113765 32301017 ~ 32304576 (+) False XLOC_037250
TCONS_00073310 mRNA downstream 113873 32301125 ~ 32305005 (+) False XLOC_037250
TCONS_00073311 mRNA downstream 113873 32301125 ~ 32305007 (+) False XLOC_037250
TCONS_00073312 mRNA downstream 114204 32301456 ~ 32305005 (+) False XLOC_037250
TCONS_00073313 mRNA downstream 114297 32301549 ~ 32304576 (+) False XLOC_037250
TCONS_00073304 other upstream 80248 32100203 ~ 32103807 (+) True XLOC_037246
TCONS_00073294 other upstream 190622 31993311 ~ 31993433 (+) True XLOC_037244
TCONS_00073291 other upstream 611376 31566399 ~ 31572679 (+) True XLOC_037241
TCONS_00073288 other upstream 688290 31495648 ~ 31495765 (+) True XLOC_037239
TCONS_00073282 other upstream 1017653 31076056 ~ 31166402 (+) False XLOC_037235
TCONS_00073322 other downstream 461824 32649076 ~ 32652072 (+) False XLOC_037255
TCONS_00073333 other downstream 887428 33074680 ~ 33082181 (+) True XLOC_037261
TCONS_00073341 other downstream 993430 33180682 ~ 33181352 (+) True XLOC_037264
TCONS_00073351 other downstream 1056946 33244198 ~ 33245755 (+) True XLOC_037270
TCONS_00073362 other downstream 1623194 33810446 ~ 33836470 (+) True XLOC_037278

Expression Profile

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