RNA id: TCONS_00073369


Basic Information

Item Value
RNA id TCONS_00073369
length 1265
RNA type mRNA
GC content 0.42
exon number 5
gene id XLOC_037283
representative False

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 34221997 ~ 34227472 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATTACGCGATTCGCTTTGCGACGCGTCCCCGCTGACACTTCCCAAGACAACACAACAGTAAACTGCATTAGCAAGGTCGAAAGTAGGGCAATAACGTTAACTTTGCACTTTATGCTCGTccaaaggttttgttttattgATCACCGGCTCCTGCCTTTTGGAAACATCACGAGTCAATAGTAGAAGACTGCTTTGCACATCCCGTGCTGTGTTTTTAGTGAGGGCAGCGGTAGCATTTAGCTCCTTTAACGTTAGCAGTCATCATGGCTATGGTGGGGCTGAGAGCTTCTTACCACAGAATCCTCGACAGGATGGAGCACATGCTGCCGGCTAAACTGAGACCCTTTTATAACCACCCTGCAGGTCCAAAGACTGTCTTCTTCTGGGCACCAATGTTCAAATGGggcctggtcttagctggattAGCAGACATGGCACGTCCAGCTGAGAAACTCAGTACTTCCCAATCTGCTGTGCTGACAGCTACAGGTCTCATCTGGTCCAGGTATTCCCTGGTTATTATACCCAAGAACTGGAACCTGTTTGCTGTGAACTTCTTTGTTGGAAGTGCAGGAGGATCACAGCTGTACAGGATATGGATGCATAACCGAGAACAGAAGGCAAAGGAGAAAGAAGCACAGGCTTGATAGCAGTGCAGTTTAAAATGCATCCAGAGGACCGAAAGGGACTCTCCTCTACTGCTAACCCAGAAAATTCCCTTCCATCATCAGTCATCCAGTAGAGCCTCCACAAACAGTTTCTTTAGTAATAAACACAGATCATGGGATTTGTTTTAGAGTTCAGGTCAACCTCCTGTGCCACTAGAATCTAAAGCAACCATCTTCACGGTTGTTAATAACGCACAACATGTTACATATTCATCTTAGTACGATTGTACATTCTTTTAAATCCTCATGTTTGAAATGCATCGTGATCAAGGTGCTTTCCTTCCAACATACTTGAGTGTCCATCCTAATTACTGATTAAGGAGTGCATTTGTTCACTCGACCTCTGTCATGCTGTTAACAGAATGTCTccaaataaattttataaaagtCTCTTCCATTATATGTATTTCttaggaaatatttattaaacggctgtaatacatttttatttttgattttagtTGTTAGTTTAACTTCATAATCCTTAAAGTGCTTTCGTTAAAACCCATACGTTATGAAATACACAAATGAACGGTACTGTAACATTGGATTCATTTTGGATCAAAATGAAGTAACATTAAAGTCAGATTTACTAAA

Function

GO: NA

KEGG:

id description
ko05415 Diabetic cardiomyopathy
ko03029 Mitochondrial biogenesis
ko02000 Transporters

Ensembl:

ensembl_id ENSDART00000028617

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00075163 lncRNA upstream 213431 33997269 ~ 34008566 (+) False XLOC_037279
TCONS_00073363 lncRNA upstream 215159 33997301 ~ 34006838 (+) True XLOC_037279
TCONS_00075162 lncRNA upstream 216415 33997142 ~ 34005582 (+) False XLOC_037279
TCONS_00075160 lncRNA upstream 457820 33726714 ~ 33764177 (+) False XLOC_037276
TCONS_00075161 lncRNA upstream 469592 33733161 ~ 33752405 (+) True XLOC_037276
TCONS_00075164 lncRNA downstream 59282 34286754 ~ 34296124 (+) True XLOC_037285
TCONS_00074919 lncRNA downstream 143388 34370860 ~ 34378332 (+) False XLOC_037287
TCONS_00074920 lncRNA downstream 144135 34371607 ~ 34378100 (+) False XLOC_037287
TCONS_00074921 lncRNA downstream 144664 34372136 ~ 34373543 (+) False XLOC_037287
TCONS_00074922 lncRNA downstream 145376 34372848 ~ 34374055 (+) False XLOC_037287
TCONS_00073367 mRNA upstream 59623 34148714 ~ 34162374 (+) False XLOC_037282
TCONS_00073368 mRNA upstream 59950 34151367 ~ 34162047 (+) True XLOC_037282
TCONS_00073365 mRNA upstream 74001 34127005 ~ 34147996 (+) False XLOC_037281
TCONS_00073366 mRNA upstream 74001 34127006 ~ 34147996 (+) True XLOC_037281
TCONS_00073364 mRNA upstream 108788 34089156 ~ 34113209 (+) True XLOC_037280
TCONS_00073371 mRNA downstream 2595 34230067 ~ 34238980 (+) False XLOC_037284
TCONS_00073372 mRNA downstream 5031 34232503 ~ 34243967 (+) True XLOC_037284
TCONS_00073373 mRNA downstream 91861 34319333 ~ 34352612 (+) False XLOC_037286
TCONS_00073374 mRNA downstream 91861 34319333 ~ 34352617 (+) False XLOC_037286
TCONS_00073375 mRNA downstream 103896 34331368 ~ 34342263 (+) False XLOC_037286
TCONS_00073362 other upstream 385527 33810446 ~ 33836470 (+) True XLOC_037278
TCONS_00073351 other upstream 976242 33244198 ~ 33245755 (+) True XLOC_037270
TCONS_00073341 other upstream 1040645 33180682 ~ 33181352 (+) True XLOC_037264
TCONS_00073333 other upstream 1139816 33074680 ~ 33082181 (+) True XLOC_037261
TCONS_00073322 other upstream 1569925 32649076 ~ 32652072 (+) False XLOC_037255
TCONS_00073383 other downstream 198256 34425728 ~ 34429112 (+) False XLOC_037290
TCONS_00073385 other downstream 198303 34425775 ~ 34429120 (+) False XLOC_037290
TCONS_00073386 other downstream 198819 34426291 ~ 34429220 (+) True XLOC_037290
TCONS_00073390 other downstream 563278 34790750 ~ 34790887 (+) True XLOC_037293
TCONS_00073397 other downstream 741978 34969450 ~ 34969567 (+) True XLOC_037296

Expression Profile

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Homologous

species RNA id representative length rna type GC content exon number chromosome id location
grasscarp (Ctenopharyngodon idella) TU58746 False 2535 TUCP 0.37 5 CI01000009 3202772 ~ 3208984 (+)