Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00074500 |
| length | 867 |
| lncRNA type | retained_intron |
| GC content | 0.42 |
| exon number | 4 |
| gene id | XLOC_037960 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007120.7 |
| NCBI id | CM002893.2 |
| chromosome length | 56459846 |
| location | 32797816 ~ 32804953 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0008150 | biological_process | biological_process |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0003674 | molecular_function | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050417-147 | Predicted to be active in mitochondrion. Is expressed in alar plate midbrain region; digestive system; head; optic tectum; and optic vesicle. Orthologous to human GATD3 (glutamine amidotransferase class 1 domain containing 3). |
| ensembl_id | ENSDART00000133382 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00075000 | lncRNA | downstream | 5854 | 32772475 ~ 32795884 (-) | True | XLOC_037958 |
| TCONS_00075392 | lncRNA | downstream | 19778 | 32761062 ~ 32781960 (-) | False | XLOC_037958 |
| TCONS_00074480 | lncRNA | downstream | 484903 | 32316139 ~ 32316835 (-) | True | XLOC_037944 |
| TCONS_00075391 | lncRNA | downstream | 522551 | 32271066 ~ 32279187 (-) | False | XLOC_037942 |
| TCONS_00074998 | lncRNA | downstream | 522686 | 32271066 ~ 32279052 (-) | False | XLOC_037942 |
| TCONS_00074504 | lncRNA | upstream | 39105 | 32844013 ~ 32844887 (-) | False | XLOC_037963 |
| TCONS_00074505 | lncRNA | upstream | 41246 | 32846154 ~ 32847484 (-) | True | XLOC_037963 |
| TCONS_00075393 | lncRNA | upstream | 132921 | 32937829 ~ 32941228 (-) | True | XLOC_037966 |
| TCONS_00075394 | lncRNA | upstream | 305296 | 33110204 ~ 33122114 (-) | True | XLOC_037970 |
| TCONS_00074515 | lncRNA | upstream | 313706 | 33118614 ~ 33119756 (-) | False | XLOC_037971 |
| TCONS_00074497 | mRNA | downstream | 48203 | 32751428 ~ 32753535 (-) | True | XLOC_037957 |
| TCONS_00074493 | mRNA | downstream | 71251 | 32728653 ~ 32730487 (-) | True | XLOC_037955 |
| TCONS_00074492 | mRNA | downstream | 117730 | 32674676 ~ 32684008 (-) | True | XLOC_037954 |
| TCONS_00074491 | mRNA | downstream | 129609 | 32670526 ~ 32672129 (-) | True | XLOC_037953 |
| TCONS_00074490 | mRNA | downstream | 132810 | 32667169 ~ 32668928 (-) | True | XLOC_037952 |
| TCONS_00074501 | mRNA | upstream | 780 | 32805688 ~ 32813177 (-) | True | XLOC_037961 |
| TCONS_00074502 | mRNA | upstream | 19731 | 32824639 ~ 32837860 (-) | True | XLOC_037962 |
| TCONS_00074503 | mRNA | upstream | 35206 | 32840114 ~ 32847642 (-) | False | XLOC_037963 |
| TCONS_00074507 | mRNA | upstream | 90095 | 32895003 ~ 32912638 (-) | True | XLOC_037965 |
| TCONS_00074508 | mRNA | upstream | 256656 | 33061564 ~ 33063083 (-) | False | XLOC_037967 |
| TCONS_00074498 | other | downstream | 16201 | 32785417 ~ 32785537 (-) | True | XLOC_037959 |
| TCONS_00074494 | other | downstream | 53944 | 32745088 ~ 32747794 (-) | False | XLOC_037956 |
| TCONS_00074496 | other | downstream | 53973 | 32745944 ~ 32747765 (-) | True | XLOC_037956 |
| TCONS_00074495 | other | downstream | 53992 | 32745326 ~ 32747746 (-) | False | XLOC_037956 |
| TCONS_00074489 | other | downstream | 136276 | 32662314 ~ 32665462 (-) | True | XLOC_037951 |
| TCONS_00074506 | other | upstream | 78383 | 32883291 ~ 32885181 (-) | True | XLOC_037964 |
| TCONS_00074518 | other | upstream | 442294 | 33247202 ~ 33249282 (-) | False | XLOC_037975 |
| TCONS_00074519 | other | upstream | 442455 | 33247363 ~ 33250079 (-) | False | XLOC_037975 |
| TCONS_00074520 | other | upstream | 442458 | 33247366 ~ 33251006 (-) | False | XLOC_037975 |
| TCONS_00074521 | other | upstream | 444370 | 33249278 ~ 33250994 (-) | True | XLOC_037975 |
