RNA id: TU92275



Basic Information


Item Value
RNA id TU92275
length 611
RNA type TUCP
GC content 0.50
exon number 4
gene id G68897
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41752536 ~ 41829133 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GCTGATGTTAATGTctgcctctgtgtctgtgtgtgtgcgtgtgtctgtctgtctctctgtgcgtgtctgtctgcctctgtgtgtgtgtgtctgtctgcctctgtgtgtgtgtgtgtgtctgtctgcctctgtgtgtgtgtgtgtgtgtgtctgcctgtgtgtgtgtgtgtctgtctgcctctgtgtgtgtgtgtgtgtgtctgtctgtgtgtgtgtgtgtgtgtctgtctgtgtgtttgtgtgtgtgtgtgtctttttgtctatgtctgtgtgtgtgtgtgtctgtgtgtgtgtcctatctctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtttgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtttctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgg

Function


GO: NA

KEGG:

id description
ko00350 Tyrosine metabolism
ko04916 Melanogenesis

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92502 lncRNA downstream 8048 41743438 ~ 41744488 (-) True G69062
TU92496 lncRNA downstream 18736 41733369 ~ 41733800 (-) True G69058
TU92257 lncRNA downstream 51065 41660768 ~ 41701471 (-) False G68882
TU92252 lncRNA downstream 51065 41700054 ~ 41701471 (-) False G68882
TU92256 lncRNA downstream 73549 41660768 ~ 41678987 (-) True G68882
TU92296 lncRNA upstream 34643 41863776 ~ 41864424 (-) True G68918
TU92522 lncRNA upstream 73768 41902901 ~ 41903622 (-) False G69078
TU92524 lncRNA upstream 73768 41902901 ~ 41903622 (-) True G69078
TU92305 lncRNA upstream 98601 41927734 ~ 41928031 (-) True G68927
TU92302 lncRNA upstream 100102 41929235 ~ 41988063 (-) True G68924
XM_039802497.1 mRNA downstream 155626 41588921 ~ 41596910 (-) True bag4
XM_039802519.1 mRNA downstream 170184 41572144 ~ 41582352 (-) True LOC120560239
XM_039804054.1 mRNA downstream 203632 41537525 ~ 41548904 (-) True LOC120561099
XM_039802467.1 mRNA downstream 239077 41502111 ~ 41513459 (-) False LOC120560202
XM_039802468.1 mRNA downstream 241551 41502111 ~ 41510985 (-) True LOC120560202
XM_039804056.1 mRNA upstream 8493 41837626 ~ 41858498 (-) True LOC120561103
XM_039804057.1 mRNA upstream 38106 41867239 ~ 41882013 (-) True LOC120561104
XM_039804059.1 mRNA upstream 109848 41938981 ~ 42022357 (-) True LOC120561107
XM_039804060.1 mRNA upstream 205090 42034223 ~ 42047509 (-) True LOC120561108
XM_039802472.1 mRNA upstream 249453 42078586 ~ 42094518 (-) False LOC120560203
TU92249 other downstream 350635 41380388 ~ 41401901 (-) False LOC120560231
TU92377 other downstream 675071 41076005 ~ 41077465 (-) True G68985
TU92335 other downstream 801929 40924074 ~ 40950607 (-) True G68952
TU92028 other downstream 1421859 40324206 ~ 40330677 (-) False ppp2r2aa
XR_005639415.1 other downstream 1725793 40002598 ~ 40026743 (-) False LOC120560061
TU92260 other upstream 7414 41836547 ~ 42073980 (-) True G68883
TU92301 other upstream 99355 41928488 ~ 41929179 (-) True G68923
XR_005639438.1 other upstream 269653 42098786 ~ 42107121 (-) False rnf34a
XR_005639437.1 other upstream 271242 42100375 ~ 42107122 (-) False rnf34a
TU92299 other upstream 278497 42107630 ~ 42116261 (-) True G68921

Expression Profile