RNA id: TU92285



Basic Information


Item Value
RNA id TU92285
length 752
RNA type TUCP
GC content 0.40
exon number 2
gene id G68907
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41754872 ~ 41782162 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GTTCtgtttgttgctgctgacagactcagattattattctaatgtctgacaacattatgggatggatccctacagagatagaccttttagttaaagagtaagatccttttagtttaacatgaaacagccccgaaatcactatcaccaaactccaccagactccatgtaaataatcaggacttttatcatcgtaaaacacacttcattcaaagtggacagaaactaaataaaactaccaaaagccgtcttggttcatctttccactgttccaacaatcaccactctggtttggttgaaataaacccttaattcacccatttacatgtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggaaatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtagagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctacacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaatgtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92502 lncRNA downstream 10384 41743438 ~ 41744488 (-) True G69062
TU92496 lncRNA downstream 21072 41733369 ~ 41733800 (-) True G69058
TU92257 lncRNA downstream 53401 41660768 ~ 41701471 (-) False G68882
TU92252 lncRNA downstream 53401 41700054 ~ 41701471 (-) False G68882
TU92256 lncRNA downstream 75885 41660768 ~ 41678987 (-) True G68882
TU92279 lncRNA upstream 46167 41828329 ~ 41859014 (-) True G68901
TU92296 lncRNA upstream 81614 41863776 ~ 41864424 (-) True G68918
TU92522 lncRNA upstream 120739 41902901 ~ 41903622 (-) False G69078
TU92524 lncRNA upstream 120739 41902901 ~ 41903622 (-) True G69078
TU92305 lncRNA upstream 145572 41927734 ~ 41928031 (-) True G68927
XM_039802497.1 mRNA downstream 157962 41588921 ~ 41596910 (-) True bag4
XM_039802519.1 mRNA downstream 172520 41572144 ~ 41582352 (-) True LOC120560239
XM_039804054.1 mRNA downstream 205968 41537525 ~ 41548904 (-) True LOC120561099
XM_039802468.1 mRNA downstream 243887 41502111 ~ 41510985 (-) True LOC120560202
XM_039802475.1 mRNA upstream 14099 41796261 ~ 41815906 (-) True pold2
XM_039804056.1 mRNA upstream 55464 41837626 ~ 41858498 (-) True LOC120561103
XM_039804057.1 mRNA upstream 85077 41867239 ~ 41882013 (-) True LOC120561104
XM_039804059.1 mRNA upstream 156819 41938981 ~ 42022357 (-) True LOC120561107
XM_039804060.1 mRNA upstream 252061 42034223 ~ 42047509 (-) True LOC120561108
TU92249 other downstream 352971 41380388 ~ 41401901 (-) False LOC120560231
TU92377 other downstream 677407 41076005 ~ 41077465 (-) True G68985
TU92335 other downstream 804265 40924074 ~ 40950607 (-) True G68952
TU92028 other downstream 1424195 40324206 ~ 40330677 (-) False ppp2r2aa
XR_005639415.1 other downstream 1728129 40002598 ~ 40026743 (-) False LOC120560061
TU92260 other upstream 54385 41836547 ~ 42073980 (-) True G68883
TU92301 other upstream 146326 41928488 ~ 41929179 (-) True G68923
XR_005639438.1 other upstream 316624 42098786 ~ 42107121 (-) False rnf34a
XR_005639437.1 other upstream 318213 42100375 ~ 42107122 (-) False rnf34a
TU92299 other upstream 325468 42107630 ~ 42116261 (-) True G68921

Expression Profile