RNA id: TU92292



Basic Information


Item Value
RNA id TU92292
length 305
lncRNA type sense_over
GC content 0.51
exon number 2
gene id G68914
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42039860 ~ 42042664 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


cacacacagacacacacacacacacacagacacacacacacagagacacacagacacacacacccacacagacacacacacacacagacacacacacagacacacacacacacacacagacacacacagcaccagcacgcgccacacacacacacagacacacacacacacacacacacacacacacacagaaagagacacacacacacacacacacacacagacacacacacacacacacagacacacacacatacacacacacacagacacaaacacacacacacacacacacacacacacag

Function


GO: NA

KEGG:

id description
ko00350 Tyrosine metabolism
ko04916 Melanogenesis

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92552 lncRNA downstream 395 42038990 ~ 42039465 (-) True G69094
TU92298 lncRNA downstream 31522 41943696 ~ 42008338 (-) True G68920
TU92293 lncRNA downstream 46369 41988436 ~ 41993491 (-) True G68915
TU92542 lncRNA downstream 47438 41956372 ~ 41992422 (-) True G69087
TU92302 lncRNA downstream 51797 41929235 ~ 41988063 (-) True G68924
TU92303 lncRNA upstream 2252 42044916 ~ 42089920 (-) True G68925
TU92297 lncRNA upstream 47409 42090073 ~ 42090529 (-) True G68919
TU92562 lncRNA upstream 70128 42112792 ~ 42113892 (-) False G69104
TU92563 lncRNA upstream 70580 42113244 ~ 42114759 (-) True G69104
TU92572 lncRNA upstream 167274 42209938 ~ 42223138 (-) True G69110
XM_039804059.1 mRNA downstream 17503 41938981 ~ 42022357 (-) True LOC120561107
XM_039804057.1 mRNA downstream 157847 41867239 ~ 41882013 (-) True LOC120561104
XM_039804056.1 mRNA downstream 181362 41837626 ~ 41858498 (-) True LOC120561103
XM_039802475.1 mRNA downstream 223954 41796261 ~ 41815906 (-) True pold2
XM_039802497.1 mRNA downstream 442950 41588921 ~ 41596910 (-) True bag4
XM_039802472.1 mRNA upstream 35922 42078586 ~ 42094518 (-) False LOC120560203
XM_039802471.1 mRNA upstream 35922 42078586 ~ 42094518 (-) False LOC120560203
XM_039802470.1 mRNA upstream 35922 42078586 ~ 42094518 (-) True LOC120560203
XM_039802501.1 mRNA upstream 55663 42098327 ~ 42107117 (-) False rnf34a
XM_039802500.1 mRNA upstream 55663 42098327 ~ 42107116 (-) True rnf34a
TU92301 other downstream 110681 41928488 ~ 41929179 (-) True G68923
TU92275 other downstream 210727 41752536 ~ 41829133 (-) True G68897
TU92285 other downstream 257698 41754872 ~ 41782162 (-) True G68907
TU92249 other downstream 637959 41380388 ~ 41401901 (-) False LOC120560231
TU92377 other downstream 962395 41076005 ~ 41077465 (-) True G68985
XR_005639438.1 other upstream 56122 42098786 ~ 42107121 (-) False rnf34a
XR_005639437.1 other upstream 57711 42100375 ~ 42107122 (-) False rnf34a
TU92299 other upstream 64966 42107630 ~ 42116261 (-) True G68921
TU92564 other upstream 70128 42112792 ~ 42114159 (-) False G69104
TU92567 other upstream 87947 42130611 ~ 42132581 (-) True G69105

Expression Profile