RNA id: TU92303



Basic Information


Item Value
RNA id TU92303
length 317
lncRNA type read_through
GC content 0.50
exon number 2
gene id G68925
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42044916 ~ 42089920 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agagacacacacacacagagacacacacacacagagacacacacacacagagacacacacacacacacacacacagagacacacacacacagagacacacacacacacacacagagacacacacactcacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccgacactcacagacacagacacacacacagagacacacaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92292 lncRNA downstream 2252 42039860 ~ 42042664 (-) True G68914
TU92552 lncRNA downstream 5451 42038990 ~ 42039465 (-) True G69094
TU92298 lncRNA downstream 36578 41943696 ~ 42008338 (-) True G68920
TU92297 lncRNA upstream 153 42090073 ~ 42090529 (-) True G68919
TU92562 lncRNA upstream 22872 42112792 ~ 42113892 (-) False G69104
TU92563 lncRNA upstream 23324 42113244 ~ 42114759 (-) True G69104
TU92572 lncRNA upstream 120018 42209938 ~ 42223138 (-) True G69110
TU92596 lncRNA upstream 276109 42366029 ~ 42443845 (-) True G69127
XM_039804059.1 mRNA downstream 22559 41938981 ~ 42022357 (-) True LOC120561107
XM_039804057.1 mRNA downstream 162903 41867239 ~ 41882013 (-) True LOC120561104
XM_039804056.1 mRNA downstream 186418 41837626 ~ 41858498 (-) True LOC120561103
XM_039802475.1 mRNA downstream 229010 41796261 ~ 41815906 (-) True pold2
XM_039802497.1 mRNA downstream 448006 41588921 ~ 41596910 (-) True bag4
XM_039802501.1 mRNA upstream 8407 42098327 ~ 42107117 (-) False rnf34a
XM_039802500.1 mRNA upstream 8407 42098327 ~ 42107116 (-) True rnf34a
XM_039802504.1 mRNA upstream 8851 42098771 ~ 42107121 (-) False rnf34a
XM_039802503.1 mRNA upstream 10407 42100327 ~ 42107121 (-) False rnf34a
XM_039804062.1 mRNA upstream 21828 42111748 ~ 42136339 (-) True LOC120561110
TU92301 other downstream 115737 41928488 ~ 41929179 (-) True G68923
TU92275 other downstream 215783 41752536 ~ 41829133 (-) True G68897
TU92285 other downstream 262754 41754872 ~ 41782162 (-) True G68907
TU92249 other downstream 643015 41380388 ~ 41401901 (-) False LOC120560231
TU92377 other downstream 967451 41076005 ~ 41077465 (-) True G68985
XR_005639438.1 other upstream 8866 42098786 ~ 42107121 (-) False rnf34a
XR_005639437.1 other upstream 10455 42100375 ~ 42107122 (-) False rnf34a
TU92299 other upstream 17710 42107630 ~ 42116261 (-) True G68921
TU92564 other upstream 22872 42112792 ~ 42114159 (-) False G69104
TU92567 other upstream 40691 42130611 ~ 42132581 (-) True G69105

Expression Profile