RNA id: TU92389



Basic Information


Item Value
RNA id TU92389
length 293
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G68987
representative False

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41158429 ~ 41240435 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tgtgtgtgtgtgtgtgtgtttgtgtctgtgtgtgtttgtgtctgtgtgtgtgtgtgtgtgtttgtgtctgtgtgtttgtgtgtgtgtgtctttgtctctgtctgtgtgtgtgtgtttttgtgtgtctctgtttgtgtgtgtgtgtgtgtgtctctgtctgtctgtgtgtgtgtgtgtgtgtgtgtctctgtctgtgtgtgtgtgttttgtgtgtctctgtttgtctgtgtgtgtgtgtgtctgtgtttaaccCTTCTCCCGTGTCCCAGATGTTGTCCCAGATGTTCTATCAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92347 lncRNA downstream 120216 40946238 ~ 41084401 (-) False G68963
TU92358 lncRNA downstream 134485 41025192 ~ 41070132 (-) False G68971
TU92371 lncRNA downstream 148635 41036734 ~ 41055982 (-) True G68981
TU92363 lncRNA downstream 150697 40984798 ~ 41053920 (-) True G68973
TU92346 lncRNA downstream 161385 40946238 ~ 41043232 (-) True G68963
TU92397 lncRNA upstream 7765 41248200 ~ 41254325 (-) False G68989
TU92245 lncRNA upstream 78778 41319213 ~ 41401901 (-) False LOC120560231
TU92246 lncRNA upstream 78778 41319213 ~ 41401901 (-) False LOC120560231
TU92242 lncRNA upstream 138933 41379368 ~ 41401901 (-) False LOC120560231
TU92289 lncRNA upstream 243622 41484057 ~ 41552742 (-) True G68911
XM_039803980.1 mRNA downstream 403922 40799599 ~ 40800695 (-) True LOC120561018
XM_039802147.1 mRNA downstream 539500 40657612 ~ 40665117 (-) True LOC120560039
XM_039804397.1 mRNA downstream 553022 40642920 ~ 40651595 (-) False ciao1
XM_039802484.1 mRNA upstream 31482 41271917 ~ 41277186 (-) True LOC120560210
XM_039802508.1 mRNA upstream 50175 41290610 ~ 41456856 (-) True LOC120560230
XM_039802499.1 mRNA upstream 58719 41299154 ~ 41303757 (-) True LOC120560225
XM_039802498.1 mRNA upstream 58719 41299154 ~ 41302758 (-) False LOC120560225
XM_039802510.1 mRNA upstream 78761 41319196 ~ 41383177 (-) False LOC120560231
TU92377 other downstream 127152 41076005 ~ 41077465 (-) True G68985
TU92335 other downstream 254010 40924074 ~ 40950607 (-) True G68952
TU92028 other downstream 873940 40324206 ~ 40330677 (-) False ppp2r2aa
XR_005639415.1 other downstream 1177874 40002598 ~ 40026743 (-) False LOC120560061
TU91941 other downstream 1268771 39935372 ~ 39935846 (-) True G68717
TU92249 other upstream 139953 41380388 ~ 41401901 (-) False LOC120560231
TU92275 other upstream 512101 41752536 ~ 41829133 (-) True G68897
TU92285 other upstream 514437 41754872 ~ 41782162 (-) True G68907
TU92260 other upstream 596112 41836547 ~ 42073980 (-) True G68883
TU92301 other upstream 688053 41928488 ~ 41929179 (-) True G68923

Expression Profile