RNA id: TU92424



Basic Information


Item Value
RNA id TU92424
length 275
lncRNA type inter_gene
GC content 0.54
exon number 2
gene id G69004
representative False

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41227888 ~ 41252088 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gcacaaaaaatgcgttggcccacctatctacagctagaggagaccccacctatctacagctaggggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctaggggagacctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggataccccacctatctacagctggaggagaccccacctatctacagctagaggagacctcacc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005639435.1 lncRNA downstream 5945 41220248 ~ 41222459 (-) True LOC120560188
TU92401 lncRNA downstream 13408 41179561 ~ 41214996 (-) True G68990
TU92400 lncRNA downstream 13408 41214403 ~ 41214996 (-) False G68990
TU92392 lncRNA downstream 14068 41213527 ~ 41214336 (-) True G68988
TU92390 lncRNA downstream 14927 41158429 ~ 41213477 (-) False G68987
TU92245 lncRNA upstream 67125 41319213 ~ 41401901 (-) False LOC120560231
TU92246 lncRNA upstream 67125 41319213 ~ 41401901 (-) False LOC120560231
TU92242 lncRNA upstream 127280 41379368 ~ 41401901 (-) False LOC120560231
TU92289 lncRNA upstream 231969 41484057 ~ 41552742 (-) True G68911
XR_005639456.1 lncRNA upstream 266178 41518266 ~ 41520540 (-) True LOC120560251
XM_039803980.1 mRNA downstream 427709 40799599 ~ 40800695 (-) True LOC120561018
XM_039802147.1 mRNA downstream 563287 40657612 ~ 40665117 (-) True LOC120560039
XM_039804397.1 mRNA downstream 576809 40642920 ~ 40651595 (-) False ciao1
XM_039802484.1 mRNA upstream 19829 41271917 ~ 41277186 (-) True LOC120560210
XM_039802508.1 mRNA upstream 38522 41290610 ~ 41456856 (-) True LOC120560230
XM_039802499.1 mRNA upstream 47066 41299154 ~ 41303757 (-) True LOC120560225
XM_039802498.1 mRNA upstream 47066 41299154 ~ 41302758 (-) False LOC120560225
XM_039802510.1 mRNA upstream 67108 41319196 ~ 41383177 (-) False LOC120560231
TU92377 other downstream 150939 41076005 ~ 41077465 (-) True G68985
TU92335 other downstream 277797 40924074 ~ 40950607 (-) True G68952
TU92028 other downstream 897727 40324206 ~ 40330677 (-) False ppp2r2aa
XR_005639415.1 other downstream 1201661 40002598 ~ 40026743 (-) False LOC120560061
TU91941 other downstream 1292558 39935372 ~ 39935846 (-) True G68717
TU92249 other upstream 128300 41380388 ~ 41401901 (-) False LOC120560231
TU92275 other upstream 500448 41752536 ~ 41829133 (-) True G68897
TU92285 other upstream 502784 41754872 ~ 41782162 (-) True G68907
TU92260 other upstream 584459 41836547 ~ 42073980 (-) True G68883
TU92301 other upstream 676400 41928488 ~ 41929179 (-) True G68923

Expression Profile