RNA id: TU92502



Basic Information


Item Value
RNA id TU92502
length 209
lncRNA type inter_gene
GC content 0.35
exon number 2
gene id G69062
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41743438 ~ 41744488 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agcggagtaactaaagtaactagtaactaaagctgtaacagatgaatgtagtggagtaactaaagtaactagtaactaaagctggaacaggtgaatgtagcggagtaactaaagtaactagtaactaaagctgtaacagatgaatgtagcggagtaactaaagtaactagtaactaaagtaactagtaactaaagctggaacagatgaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92496 lncRNA downstream 9638 41733369 ~ 41733800 (-) True G69058
TU92257 lncRNA downstream 41967 41660768 ~ 41701471 (-) False G68882
TU92252 lncRNA downstream 41967 41700054 ~ 41701471 (-) False G68882
TU92256 lncRNA downstream 64451 41660768 ~ 41678987 (-) True G68882
XR_005639463.1 lncRNA downstream 114560 41627519 ~ 41628878 (-) True LOC120560256
TU92300 lncRNA upstream 4646 41749134 ~ 41859512 (-) True G68922
TU92295 lncRNA upstream 22515 41767003 ~ 41772727 (-) True G68917
TU92279 lncRNA upstream 83841 41828329 ~ 41859014 (-) True G68901
TU92296 lncRNA upstream 119288 41863776 ~ 41864424 (-) True G68918
TU92522 lncRNA upstream 158413 41902901 ~ 41903622 (-) False G69078
XM_039802497.1 mRNA downstream 146528 41588921 ~ 41596910 (-) True bag4
XM_039802519.1 mRNA downstream 161086 41572144 ~ 41582352 (-) True LOC120560239
XM_039804054.1 mRNA downstream 194534 41537525 ~ 41548904 (-) True LOC120561099
XM_039802468.1 mRNA downstream 232453 41502111 ~ 41510985 (-) True LOC120560202
XM_039802475.1 mRNA upstream 51773 41796261 ~ 41815906 (-) True pold2
XM_039804056.1 mRNA upstream 93138 41837626 ~ 41858498 (-) True LOC120561103
XM_039804057.1 mRNA upstream 122751 41867239 ~ 41882013 (-) True LOC120561104
XM_039804059.1 mRNA upstream 194493 41938981 ~ 42022357 (-) True LOC120561107
XM_039804060.1 mRNA upstream 289735 42034223 ~ 42047509 (-) True LOC120561108
TU92249 other downstream 341537 41380388 ~ 41401901 (-) False LOC120560231
TU92377 other downstream 665973 41076005 ~ 41077465 (-) True G68985
TU92335 other downstream 792831 40924074 ~ 40950607 (-) True G68952
TU92028 other downstream 1412761 40324206 ~ 40330677 (-) False ppp2r2aa
XR_005639415.1 other downstream 1716695 40002598 ~ 40026743 (-) False LOC120560061
TU92275 other upstream 8048 41752536 ~ 41829133 (-) True G68897
TU92285 other upstream 10384 41754872 ~ 41782162 (-) True G68907
TU92260 other upstream 92059 41836547 ~ 42073980 (-) True G68883
TU92301 other upstream 184000 41928488 ~ 41929179 (-) True G68923
XR_005639438.1 other upstream 354298 42098786 ~ 42107121 (-) False rnf34a

Expression Profile