RNA id: TU92564


Basic Information

Item Value
RNA id TU92564
length 522
RNA type TUCP
GC content 0.53
exon number 4
gene id G69104
representative False

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42112792 ~ 42114759 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ACACAgggggacacacagggacacagggggacacacggacacacacagggGGACACACGGGGAgacacacatggagacacacaaggggacacacagggacacacatacagacagagggacacacacacacacacatacagacagagggacacacacacacatacagacagagggacacacacacacacatacagacagagggacacacacacacacatacagacagagggacacacacacacacacatacagacagagggacacacacacacacatacagacagagggacacacacacacacatacagacagagggacacacacacacacacacatacagacagagggacacacacacacacatacagacagagggacacacacacacacacacacacagagggacacacacacacacacacacacagacagggacacacacacacagaaatgaacTGAATTGAAAGCTGCAGTTTCTGACCGCTGTCCTCTCTGTCCCCCCTCTGTGTCCCCtctgtcccc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92297 lncRNA downstream 22263 42090073 ~ 42090529 (-) True G68919
TU92303 lncRNA downstream 22872 42044916 ~ 42089920 (-) True G68925
TU92292 lncRNA downstream 70128 42039860 ~ 42042664 (-) True G68914
TU92552 lncRNA downstream 73327 42038990 ~ 42039465 (-) True G69094
TU92293 lncRNA downstream 119301 41988436 ~ 41993491 (-) True G68915
TU92572 lncRNA upstream 95779 42209938 ~ 42223138 (-) True G69110
TU92596 lncRNA upstream 251870 42366029 ~ 42443845 (-) True G69127
TU92599 lncRNA upstream 281922 42396081 ~ 42413217 (-) True G69129
TU92602 lncRNA upstream 311593 42425752 ~ 42495934 (-) True G69131
TU92622 lncRNA upstream 383406 42497565 ~ 42536958 (-) False G69140
XM_039802504.1 mRNA downstream 5671 42098771 ~ 42107121 (-) False rnf34a
XM_039802503.1 mRNA downstream 5671 42100327 ~ 42107121 (-) False rnf34a
XM_039802501.1 mRNA downstream 5675 42098327 ~ 42107117 (-) False rnf34a
XM_039802500.1 mRNA downstream 5676 42098327 ~ 42107116 (-) True rnf34a
XM_039802470.1 mRNA downstream 18274 42078586 ~ 42094518 (-) True LOC120560203
XM_039802495.1 mRNA upstream 61317 42175476 ~ 42179298 (-) True LOC120560222
XM_039802485.1 mRNA upstream 95042 42209201 ~ 42212702 (-) True LOC120560212
XM_039802496.1 mRNA upstream 127577 42241736 ~ 42256884 (-) True hpdb
XM_039802434.1 mRNA upstream 148266 42262425 ~ 42271211 (-) True LOC120560191
XM_039802513.1 mRNA upstream 544197 42658356 ~ 42662019 (-) True LOC120560234
XR_005639437.1 other downstream 5670 42100375 ~ 42107122 (-) False rnf34a
XR_005639438.1 other downstream 5671 42098786 ~ 42107121 (-) False rnf34a
TU92260 other downstream 38812 41836547 ~ 42073980 (-) True G68883
TU92301 other downstream 183613 41928488 ~ 41929179 (-) True G68923
TU92285 other downstream 330630 41754872 ~ 41782162 (-) True G68907
TU92567 other upstream 16452 42130611 ~ 42132581 (-) True G69105
TU92624 other upstream 421108 42535267 ~ 42536075 (-) False G69140
TU92678 other upstream 658832 42772991 ~ 42809622 (-) False LOC120561114
TU92739 other upstream 855925 42970084 ~ 43014065 (-) False G69229
TU92741 other upstream 855925 42970084 ~ 43014065 (-) False G69229

Expression Profile