RNA id: TU92572



Basic Information


Item Value
RNA id TU92572
length 214
lncRNA type sense_over
GC content 0.39
exon number 2
gene id G69110
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42209938 ~ 42223138 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ctcttaattcacccatttacatgtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggaaatatgctggctctatacacgctaaaagtccttattatttacatggagtctggtggaaatatgctggctctatacacgttaaaagtcctgattatttacatggagtctggtggaaatatgctggctctat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92563 lncRNA downstream 95179 42113244 ~ 42114759 (-) True G69104
TU92562 lncRNA downstream 96046 42112792 ~ 42113892 (-) False G69104
TU92297 lncRNA downstream 119409 42090073 ~ 42090529 (-) True G68919
TU92303 lncRNA downstream 120018 42044916 ~ 42089920 (-) True G68925
TU92292 lncRNA downstream 167274 42039860 ~ 42042664 (-) True G68914
TU92596 lncRNA upstream 142891 42366029 ~ 42443845 (-) True G69127
TU92599 lncRNA upstream 172943 42396081 ~ 42413217 (-) True G69129
TU92602 lncRNA upstream 202614 42425752 ~ 42495934 (-) True G69131
TU92622 lncRNA upstream 274427 42497565 ~ 42536958 (-) False G69140
TU92626 lncRNA upstream 274427 42497565 ~ 42536958 (-) False G69140
XM_039802495.1 mRNA downstream 30640 42175476 ~ 42179298 (-) True LOC120560222
XM_039804062.1 mRNA downstream 73599 42111748 ~ 42136339 (-) True LOC120561110
XM_039802504.1 mRNA downstream 102817 42098771 ~ 42107121 (-) False rnf34a
XM_039802503.1 mRNA downstream 102817 42100327 ~ 42107121 (-) False rnf34a
XM_039802501.1 mRNA downstream 102821 42098327 ~ 42107117 (-) False rnf34a
XM_039802496.1 mRNA upstream 18598 42241736 ~ 42256884 (-) True hpdb
XM_039802434.1 mRNA upstream 39287 42262425 ~ 42271211 (-) True LOC120560191
XM_039802513.1 mRNA upstream 435218 42658356 ~ 42662019 (-) True LOC120560234
XM_039802515.1 mRNA upstream 435218 42658356 ~ 42661523 (-) False LOC120560234
XM_039804064.1 mRNA upstream 440225 42663363 ~ 42809589 (-) True LOC120561114
TU92567 other downstream 77357 42130611 ~ 42132581 (-) True G69105
TU92299 other downstream 93677 42107630 ~ 42116261 (-) True G68921
TU92564 other downstream 95779 42112792 ~ 42114159 (-) False G69104
XR_005639437.1 other downstream 102816 42100375 ~ 42107122 (-) False rnf34a
XR_005639438.1 other downstream 102817 42098786 ~ 42107121 (-) False rnf34a
TU92624 other upstream 312129 42535267 ~ 42536075 (-) False G69140
TU92678 other upstream 549853 42772991 ~ 42809622 (-) False LOC120561114
TU92739 other upstream 746946 42970084 ~ 43014065 (-) False G69229
TU92741 other upstream 746946 42970084 ~ 43014065 (-) False G69229
TU92743 other upstream 779117 43002255 ~ 43003347 (-) False chek2

Expression Profile